RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 SLC36A2Q495M3 483 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 C10orf128Q5T292 105 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 GKAP1Q5VSY0 366 aaPredicted RBP19.9■□□□□ 0.78
PTPN4-208ENST00000460289 FAM205BPQ63HN1 556 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 TMEM53Q6P2H8 277 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 SLC16A14Q7RTX9 510 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 OR4K5Q8NGD3 323 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 SLC7A13Q8TCU3 470 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 PYURFQ96I23 114 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 C7orf34Q96L11 122 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 RBP7Q96R05 134 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 SH3GL3Q99963 347 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 ALG12Q9BV10 488 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 PLK3Q9H4B4 646 aa19.9■□□□□ 0.78
PTPN4-208ENST00000460289 ZNF346Q9UL40 294 aaKnown RBP19.9■□□□□ 0.78
PTPN4-208ENST00000460289 PATE4P0C8F1 98 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 ZNF35P13682 527 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 GALK2Q01415 458 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 SNTB2Q13425 540 aaKnown RBP19.89■□□□□ 0.77
PTPN4-208ENST00000460289 TOP3AQ13472 1001 aaPredicted RBP19.89■□□□□ 0.77
PTPN4-208ENST00000460289 RAB39AQ14964 217 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 THEM4Q5T1C6 240 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 KRT80Q6KB66 452 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 DEFB107AQ8IZN7 70 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 LRRC75AQ8NAA5 344 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 OR10H5Q8NGA6 315 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 HTRA1Q92743 480 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 HDAC2Q92769 488 aaKnown RBP19.89■□□□□ 0.77
PTPN4-208ENST00000460289 KCNK17Q96T54 332 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 NDEL1Q9GZM8 345 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 KCNN2Q9H2S1 579 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 RNF121Q9H920 327 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 SIAEQ9HAT2 523 aa19.89■□□□□ 0.77
PTPN4-208ENST00000460289 A6NIZ1 184 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 CSF3P09919 207 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 RAP1BP61224 184 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 RAP1AP62834 184 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 CD47Q08722 323 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 ZBED5Q49AG3 693 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 PODNL1Q6PEZ8 512 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 MEX3DQ86XN8 651 aaKnown RBP19.88■□□□□ 0.77
PTPN4-208ENST00000460289 OR13C2Q8NGS9 318 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 FGFBP3Q8TAT2 258 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 NSMCE2Q96MF7 247 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 VRK1Q99986 396 aaPredicted RBP19.88■□□□□ 0.77
PTPN4-208ENST00000460289 CMAHPQ9Y471 501 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 FKBP7Q9Y680 259 aa19.88■□□□□ 0.77
PTPN4-208ENST00000460289 hCG_2039718K7EN88 272 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 FAM107AO95990 144 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 PTHP01270 115 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 RPL4P36578 427 aaKnown RBP19.87■□□□□ 0.77
PTPN4-208ENST00000460289 GPR4P46093 362 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 SMIM11AP58511 58 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 MRPS34P82930 218 aaKnown RBP19.87■□□□□ 0.77
PTPN4-208ENST00000460289 VLDLRP98155 873 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 FHL1Q13642 323 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 FGD3Q5JSP0 725 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 IGFN1Q86VF2 1251 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 FITM2Q8N6M3 262 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 FAM86B1Q8N7N1 296 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 FAM168AQ92567 244 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 MCUR1Q96AQ8 359 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 NMD3Q96D46 503 aaKnown RBP19.87■□□□□ 0.77
PTPN4-208ENST00000460289 TSPAN32Q96QS1 320 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 C1orf198Q9H425 327 aa19.87■□□□□ 0.77
PTPN4-208ENST00000460289 KRCC1Q9NPI7 259 aaPredicted RBP19.87■□□□□ 0.77
PTPN4-208ENST00000460289 CDC42EP2O14613 210 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 SLC2A10O95528 541 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 MSX2P35548 267 aaPredicted RBP19.86■□□□□ 0.77
PTPN4-208ENST00000460289 GLRXP35754 106 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 GUCA1AP43080 201 aaPredicted RBP19.86■□□□□ 0.77
PTPN4-208ENST00000460289 PPOXP50336 477 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 RPS23P62266 143 aaKnown RBP19.86■□□□□ 0.77
PTPN4-208ENST00000460289 PLP2Q04941 152 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 SLC25A47Q6Q0C1 308 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 ZNF584Q8IVC4 421 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 ZNF525Q8N782 197 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 NSL1Q96IY1 281 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 DOK1Q99704 481 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 RAB1BQ9H0U4 201 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 GRHPRQ9UBQ7 328 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 SLC7A8Q9UHI5 535 aa19.86■□□□□ 0.77
PTPN4-208ENST00000460289 IGHV4-30-2A0A087WSY4 118 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 B2RBV5 119 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 ARPC2O15144 300 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 ERCC1P07992 297 aaPredicted RBP19.85■□□□□ 0.77
PTPN4-208ENST00000460289 SLC25A16P16260 332 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 HOXB4P17483 251 aaPredicted RBP19.85■□□□□ 0.77
PTPN4-208ENST00000460289 FMODQ06828 376 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 SVOPLQ8N434 492 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 LRRC18Q8N456 261 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 ARIH2OSQ8N7S6 290 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 CCDC197Q8NCU1 140 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 MAPK1IP1LQ8NDC0 245 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 SLC30A7Q8NEW0 376 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 OR1J2Q8NGS2 313 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 ZNF519Q8TB69 540 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 NSMAFQ92636 917 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 POM121Q96HA1 1249 aa19.85■□□□□ 0.77
PTPN4-208ENST00000460289 FAM46AQ96IP4 442 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms