RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SLC2A10O95528 541 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 SAGP10523 405 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-203ENST00000460264 NCK1P16333 377 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 DRD4P21917 467 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 PRDX6P30041 224 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 LSP1P33241 339 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 GLRXP35754 106 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 NR4A2P43354 598 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 PSME3P61289 254 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 FMODQ06828 376 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 TOP3AQ13472 1001 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-203ENST00000460264 SLC36A2Q495M3 483 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 C6orf52Q5T4I8 152 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 TMEM53Q6P2H8 277 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 FKBP9P1Q75LS8 142 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 RBM15BQ8NDT2 890 aaKnown RBP16.3■□□□□ 0.2
COL5A1-203ENST00000460264 ACOT11Q8WXI4 607 aaPredicted RBP16.3■□□□□ 0.2
COL5A1-203ENST00000460264 HDAC2Q92769 488 aaKnown RBP16.3■□□□□ 0.2
COL5A1-203ENST00000460264 FAM162AQ96A26 154 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 NSRP1Q9H0G5 558 aaKnown RBP16.3■□□□□ 0.2
COL5A1-203ENST00000460264 SMURF2Q9HAU4 748 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 SLC7A8Q9UHI5 535 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 UGT2A1Q9Y4X1 527 aa16.3■□□□□ 0.2
COL5A1-203ENST00000460264 SH3PXD2BA1X283 911 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 IGHMP01871 453 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 ERCC1P07992 297 aaPredicted RBP16.29■□□□□ 0.2
COL5A1-203ENST00000460264 EVX1P49640 407 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 RPS23P62266 143 aaKnown RBP16.29■□□□□ 0.2
COL5A1-203ENST00000460264 MRPS34P82930 218 aaKnown RBP16.29■□□□□ 0.2
COL5A1-203ENST00000460264 PRKCDQ05655 676 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 CD47Q08722 323 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 FHL1Q13642 323 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 TAF11Q15544 211 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 CARTPTQ16568 116 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 GKAP1Q5VSY0 366 aaPredicted RBP16.29■□□□□ 0.2
COL5A1-203ENST00000460264 ZNF730Q6ZMV8 503 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 SLC16A14Q7RTX9 510 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 TSEN54Q7Z6J9 526 aaKnown RBP16.29■□□□□ 0.2
COL5A1-203ENST00000460264 LRRC75AQ8NAA5 344 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 SLC30A7Q8NEW0 376 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 NEU4Q8WWR8 484 aaPredicted RBP16.29■□□□□ 0.2
COL5A1-203ENST00000460264 FOXN4Q96NZ1 517 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 KCNK17Q96T54 332 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 RNF121Q9H920 327 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 SPAG4Q9NPE6 437 aa16.29■□□□□ 0.2
COL5A1-203ENST00000460264 ANK3Q12955 4377 aaKnown RBP16.29■□□□□ 0.2
COL5A1-203ENST00000460264 MALRD1Q5VYJ5 2156 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 TRAV27A0A087WT01 109 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 A0A087WUU8 490 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 IGKV1D-43A0A0B4J1Z2 117 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 A8MV72 311 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-203ENST00000460264 KIAA1324LA8MWY0 1029 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-203ENST00000460264 EFCAB9A8MZ26 197 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 SYNGR3O43761 229 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 ADRA2AP08913 450 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 MMP7P09237 267 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-203ENST00000460264 IGHV4-31P0DP07 118 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 NR2C1P13056 603 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 CDAP32320 146 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 RPL27P61353 136 aaKnown RBP16.28■□□□□ 0.2
COL5A1-203ENST00000460264 GGTLC2Q14390 218 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 MBOAT2Q6ZWT7 520 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 OAFQ86UD1 273 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 IGFN1Q86VF2 1251 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 RNF113BQ8IZP6 322 aaKnown RBP16.28■□□□□ 0.2
COL5A1-203ENST00000460264 LRRC18Q8N456 261 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 PAQR4Q8N4S7 273 aaPredicted RBP16.28■□□□□ 0.2
COL5A1-203ENST00000460264 OR13C2Q8NGS9 318 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 OR51A7Q8NH64 312 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 NABP1Q96AH0 204 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 SYT3Q9BQG1 590 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 ALG12Q9BV10 488 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 C1orf198Q9H425 327 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 EGFL7Q9UHF1 273 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 RPS6KA6Q9UK32 745 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 ENPP4Q9Y6X5 453 aa16.28■□□□□ 0.2
COL5A1-203ENST00000460264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.28■□□□□ 0.2
COL5A1-203ENST00000460264 M0R233 179 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 MGRN1O60291 552 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 CCL2P13500 99 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 DAOP14920 347 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 SLC9A3P48764 834 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 CTXN1P60606 82 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 ANKDD1AQ495B1 522 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 FAM205BPQ63HN1 556 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 SLC25A47Q6Q0C1 308 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 TBPL2Q6SJ96 375 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 CPLX4Q7Z7G2 160 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 LRP11Q86VZ4 500 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 CYP4Z1Q86W10 505 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 HIPK1Q86Z02 1210 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 ZNF519Q8TB69 540 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 TSPAN32Q96QS1 320 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 TPK1Q9H3S4 243 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 ANKRD19PQ9H560 264 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 NMNAT1Q9HAN9 279 aaPredicted RBP16.27■□□□□ 0.2
COL5A1-203ENST00000460264 SIAEQ9HAT2 523 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 CDH20Q9HBT6 801 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 MYEF2Q9P2K5 600 aaKnown RBP16.27■□□□□ 0.2
COL5A1-203ENST00000460264 ZNF346Q9UL40 294 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms