RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 C8orf4Q9NR00 106 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 IER3IP1Q9Y5U9 82 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 IQCMA0A1B0GVH7 501 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 RIIAD1A6NNX1 92 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 M0R1B8 84 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 IGLV1-44P01699 117 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 EDNRAP25101 427 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 CAPZA2P47755 286 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 ZDHHC13Q8IUH4 622 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 PARP8Q8N3A8 854 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 NELFAQ9H3P2 528 aa9.36□□□□□ -0.91
UBR4-208ENST00000459947 USP9XQ93008 2570 aaPredicted RBP9.36□□□□□ -0.91
UBR4-208ENST00000459947 TEX13CA0A0J9YWL9 993 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 COX5BP10606 129 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 TUBG1P23258 451 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LSM6P62312 80 aaKnown RBP9.35□□□□□ -0.91
UBR4-208ENST00000459947 FHL1Q13642 323 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 FAM27BQ5VT28 67 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 SLC16A14Q7RTX9 510 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LNX2Q8N448 690 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 ATG16L2Q8NAA4 619 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 OR2T4Q8NH00 348 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 FBXW5Q969U6 566 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 SAMD8Q96LT4 415 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 TUBG2Q9NRH3 451 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 ORC6Q9Y5N6 252 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 OSMP13725 252 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LOXP28300 417 aaPredicted RBP9.35□□□□□ -0.91
UBR4-208ENST00000459947 CDH11P55287 796 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 HSF2Q03933 536 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 CCNIQ14094 377 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 KCNMB1Q16558 191 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 C9orf135Q5VTT2 229 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LRFN4Q6PJG9 635 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 ALDH16A1Q8IZ83 802 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 STMN2Q93045 179 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 Q96M85 177 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 RNF121Q9H920 327 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 BSNQ9UPA5 3926 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LRRK2Q5S007 2527 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 PPP1R3DO95685 299 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 IGKV3-15P01624 115 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 ZNF3P17036 446 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 ZNF83P51522 516 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 SLC25A1P53007 311 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 ESRRGP62508 458 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LGALS3BPQ08380 585 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 ARL9Q6T311 187 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LINGO2Q7L985 606 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 GLB1L2Q8IW92 636 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 LRRC75A-AS1Q8N1F1 130 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 OR10H5Q8NGA6 315 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 DCLRE1CQ96SD1 692 aaKnown RBP9.35□□□□□ -0.91
UBR4-208ENST00000459947 DHRS9Q9BPW9 319 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 TSSK6Q9BXA6 273 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 CXorf56Q9H5V9 222 aa9.35□□□□□ -0.91
UBR4-208ENST00000459947 NDRG4Q9ULP0 352 aaKnown RBP9.35□□□□□ -0.91
UBR4-208ENST00000459947 H3BSA7 217 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 LAP3P28838 519 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 BSPH1Q075Z2 132 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 TSC22D1Q15714 1073 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 HIKESHIQ53FT3 197 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 OR9Q2Q8NGE9 314 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 SLC25A19Q9HC21 320 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 LAMA5O15230 3695 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 CD79AP11912 226 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
UBR4-208ENST00000459947 MESTQ5EB52 335 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 AGAP6Q5VW22 663 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 FBXL14Q8N1E6 418 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 NUP37Q8NFH4 326 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 TMEM171Q8WVE6 324 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 FEVQ99581 238 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 CDH20Q9HBT6 801 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 PAPOLBQ9NRJ5 636 aaKnown RBP9.34□□□□□ -0.91
UBR4-208ENST00000459947 B3GNT2Q9NY97 397 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 ST6GALNAC2Q9UJ37 374 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 POU2F3Q9UKI9 436 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 TIMM10BQ9Y5J6 103 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 GASTP01350 101 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 B4GALT1P15291 398 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 MOGQ16653 247 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 TBC1D28Q2M2D7 210 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 PGGHGQ32M88 737 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 PHYHD1Q5SRE7 291 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 SLC27A4Q6P1M0 643 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 SYT14Q8NB59 555 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 PLEKHA8Q96JA3 519 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 COG8Q96MW5 612 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 ZNF442Q9H7R0 627 aa9.34□□□□□ -0.91
UBR4-208ENST00000459947 BARX1Q9HBU1 254 aaPredicted RBP9.34□□□□□ -0.91
UBR4-208ENST00000459947 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.91
UBR4-208ENST00000459947 DPRXA6NFQ7 191 aa9.33□□□□□ -0.92
UBR4-208ENST00000459947 G3V2T6 193 aa9.33□□□□□ -0.92
UBR4-208ENST00000459947 J3QW42 95 aa9.33□□□□□ -0.92
UBR4-208ENST00000459947 TIPRLO75663 272 aa9.33□□□□□ -0.92
UBR4-208ENST00000459947 APLNRP35414 380 aa9.33□□□□□ -0.92
UBR4-208ENST00000459947 GALK2Q01415 458 aa9.33□□□□□ -0.92
UBR4-208ENST00000459947 GLO1Q04760 184 aa9.33□□□□□ -0.92
UBR4-208ENST00000459947 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms