RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 GALNT16Q8N428 558 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 LINC00469Q8N7U9 141 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 ELOA3Q8NG57 546 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 OR51A4Q8NGJ6 313 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 RNF141Q8WVD5 230 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 SMARCD2Q92925 531 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 GPX7Q96SL4 187 aaPredicted RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 MNTQ99583 582 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 KIR3DX1Q9H7L2 352 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 SRA1Q9HD15 236 aaKnown RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 LYRM4Q9HD34 91 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 DEC1Q9P2X7 70 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF346Q9UL40 294 aaKnown RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 FARSAQ9Y285 508 aaKnown RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 TICRRQ7Z2Z1 1910 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF860A6NHJ4 632 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 LINC01387J3KSC0 135 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 NARSO43776 548 aaKnown RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 KCNJ3P48549 501 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 SP3Q02447 781 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 EGR3Q06889 387 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 PDZK1IP1Q13113 114 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 KCNAB1Q14722 419 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 ZNHIT3Q15649 155 aaPredicted RBP12.44□□□□□ -0.42
PTPRE-204ENST00000455661 FBXO42Q6P3S6 717 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 OR5AP2Q8NGF4 316 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 OR6N2Q8NGY6 317 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 C2CD4CQ8TF44 421 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 EDEM2Q9BV94 578 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 PTDSS2Q9BVG9 487 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 TLNRD1Q9H1K6 362 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 KCNK15Q9H427 330 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 TMEM14AQ9Y6G1 99 aa12.44□□□□□ -0.42
PTPRE-204ENST00000455661 HSPB2A8KAH6 182 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 GRXCR1A8MXD5 290 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 S100A9P06702 114 aaKnown RBP12.43□□□□□ -0.42
PTPRE-204ENST00000455661 CT62P0C5K7 136 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 HLA-GP17693 338 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 CCKBRP32239 447 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 RPS4XP62701 263 aaKnown RBP12.43□□□□□ -0.42
PTPRE-204ENST00000455661 HSPB2Q16082 182 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 LYG2Q86SG7 212 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 C10orf53Q8N6V4 93 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 DMBX1Q8NFW5 382 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 OR52R1Q8NGF1 315 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 WNT2BQ93097 391 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 TM4SF19Q96DZ7 209 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 LMF1Q96S06 567 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 PHB2Q99623 299 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 WDR76Q9H967 626 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 MYEF2Q9P2K5 600 aaKnown RBP12.43□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF107Q9UII5 783 aaPredicted RBP12.43□□□□□ -0.42
PTPRE-204ENST00000455661 MSRAQ9UJ68 235 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 TVP23AA6NH52 213 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 ACTL6AO96019 429 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 INHAP05111 366 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 HEXAP06865 529 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 CD79AP11912 226 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 AQP2P41181 271 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 AIMP2Q13155 320 aaKnown RBP12.43□□□□□ -0.42
PTPRE-204ENST00000455661 ZFP82Q8N141 532 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 STOML3Q8TAV4 291 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 RXFP4Q8TDU9 374 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 SLC22A18Q96BI1 424 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 PIK3IP1Q96FE7 263 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 TMEM74BQ9NUR3 256 aa12.43□□□□□ -0.42
PTPRE-204ENST00000455661 OR6C76A6NM76 312 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 EFCAB7A8K855 629 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 EIF1AYO14602 144 aaKnown RBP12.42□□□□□ -0.42
PTPRE-204ENST00000455661 PHYHO14832 338 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF208O43345 1280 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ALOX12BO75342 701 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 EIF3GO75821 320 aaKnown RBP eCLIP12.42□□□□□ -0.42
PTPRE-204ENST00000455661 DCNP07585 359 aaKnown RBP12.42□□□□□ -0.42
PTPRE-204ENST00000455661 CD14P08571 375 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ZNF735P0CB33 412 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ITGB8P26012 769 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 EIF1AXP47813 144 aaKnown RBP12.42□□□□□ -0.42
PTPRE-204ENST00000455661 NPBWR1P48145 328 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 CTXN1P60606 82 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 RAB5BP61020 215 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 MGAT2Q10469 447 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 MEF2DQ14814 521 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 ITPRIPL2Q3MIP1 535 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 FCRL6Q6DN72 434 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 TMEFF1Q8IYR6 380 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 PRSS35Q8N3Z0 413 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 FOXRED1Q96CU9 486 aaPredicted RBP12.42□□□□□ -0.42
PTPRE-204ENST00000455661 RSPRY1Q96DX4 576 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 PRRT1Q99946 306 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 MMP26Q9NRE1 261 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 TRPM6Q9BX84 2022 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 TTLL8A6PVC2 850 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 C4orf47A7E2U8 309 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 AKR7A3O95154 331 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 CD74P04233 296 aa12.42□□□□□ -0.42
PTPRE-204ENST00000455661 CEACAM5P06731 702 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms