RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 BCL2L2Q92843 193 aaPredicted RBP12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC38A2Q96QD8 506 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 DDOQ99489 341 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 FOXB1Q99853 325 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 WACQ9BTA9 647 aa12.57□□□□□ -0.4
HMGXB4-204ENST00000455359 ZAR1LA6NP61 321 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 MITFO75030 526 aaPredicted RBP12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 KHDRBS3O75525 346 aaKnown RBP12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 GOSR1O95249 250 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 ZNF3P17036 446 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 GRNP28799 593 aaKnown RBP12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 HOXC12P31275 282 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 KIR2DL3P43628 341 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 CENPAP49450 140 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC25A1P53007 311 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 MRPS34P82930 218 aaKnown RBP12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 PTGES3Q15185 160 aaKnown RBP12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 ZNF362Q5T0B9 420 aaPredicted RBP12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 OGFRL1Q5TC84 451 aaPredicted RBP12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 SLX4IPQ5VYV7 408 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 LEG1Q6P5S2 330 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 FOXL2NBQ6ZUU3 175 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 PTCHD4Q6ZW05 846 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 S100PBPQ96BU1 408 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 MUCL1Q96DR8 90 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 NMNAT3Q96T66 252 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 SIAEQ9HAT2 523 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 NGBQ9NPG2 151 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 TMEM38BQ9NVV0 291 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 KCNN3Q9UGI6 736 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 AMDHD2Q9Y303 409 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 FKBP7Q9Y680 259 aa12.56□□□□□ -0.4
HMGXB4-204ENST00000455359 ARPC4-TTLL3A0A0A6YYG9 625 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 C19orf84I3L1E1 186 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 RAD51DO75771 328 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 FARS2O95363 451 aaKnown RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 WNT11O96014 354 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 OR8G3PP0DMU2 310 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 PAICSP22234 425 aaKnown RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 BLVRAP53004 296 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 FOXG1P55316 489 aaPredicted RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC35F1Q5T1Q4 408 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 ACSM5Q6NUN0 579 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 KLHL24Q6TFL4 600 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 MEX3BQ6ZN04 569 aaKnown RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 ZBTB46Q86UZ6 589 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 FAM169BQ8N8A8 192 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC37A3Q8NCC5 494 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 OR2T4Q8NH00 348 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 ZNF837Q96EG3 531 aaPredicted RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC29A1Q99808 456 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 MED18Q9BUE0 208 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 NUAK2Q9H093 628 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 RACGAP1Q9H0H5 632 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 SYT4Q9H2B2 425 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 VCXQ9H320 206 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC17A5Q9NRA2 495 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 RRP15Q9Y3B9 282 aaKnown RBP12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 UGT2A1Q9Y4X1 527 aa12.55□□□□□ -0.4
HMGXB4-204ENST00000455359 A1L4Q6 167 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 SH3D21A4FU49 640 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 OR6C68A6NDL8 312 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 CASKO14936 926 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 SURF4O15260 269 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC16A7O60669 478 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC2A10O95528 541 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 EPXP11678 715 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 CTLA4P16410 223 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 UBE2NP61088 152 aaKnown RBP12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 FMODQ06828 376 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 TBRG1Q3YBR2 411 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 ZNF813Q6ZN06 617 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 GLB1L2Q8IW92 636 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 SLC22A24Q8N4F4 322 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 IQCF1Q8N6M8 205 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 TRUB1Q8WWH5 349 aaKnown RBP12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 PLEKHA8Q96JA3 519 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 WFIKKN1Q96NZ8 548 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 NMNAT2Q9BZQ4 307 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 VCX3BQ9H321 246 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 FN3KQ9H479 309 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 RIBC2Q9H4K1 309 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 FBXL3Q9UKT7 428 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 B9D1Q9UPM9 204 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 ADGRG4Q8IZF6 3080 aa12.54□□□□□ -0.4
HMGXB4-204ENST00000455359 CACNA1CQ13936 2221 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 IGLV1-36A0A0B4J1U3 117 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 E9PQ18 207 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 H7C1C5 153 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 COX6B1P14854 86 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 PEX2P28328 305 aa12.53□□□□□ -0.4
HMGXB4-204ENST00000455359 LAP3P28838 519 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms