RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ANXA2P07355 339 aaKnown RBP12.27□□□□□ -0.45
CLK3-203ENST00000454830 ATF1P18846 271 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 AVPR2P30518 371 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 CLRN1P58418 232 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 GPR85P60893 370 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 TMEM164Q5U3C3 297 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 SLC22A10Q63ZE4 541 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 KCTD18Q6PI47 426 aaPredicted RBP12.27□□□□□ -0.45
CLK3-203ENST00000454830 KCTD20Q7Z5Y7 419 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 SERPINA12Q8IW75 414 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 DNAAF1Q8NEP3 725 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 OTOSQ8NHW6 89 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 PPP1R14AQ96A00 147 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 SLC22A13Q9Y226 551 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 MS4A18H0YCH9 400 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 GATBO75879 557 aaKnown RBP12.27□□□□□ -0.45
CLK3-203ENST00000454830 PRKAR1AP10644 381 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 MS4A18Q3C1V0 323 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 DHRS13Q6UX07 377 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 AKAP14Q86UN6 197 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 UBQLNLQ8IYU4 475 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 EXD3Q8N9H8 876 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 ZBTB44Q8NCP5 570 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 OR2M3Q8NG83 312 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 OR10AC1Q8NH08 325 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 DACT3Q96B18 629 aaPredicted RBP12.27□□□□□ -0.45
CLK3-203ENST00000454830 FRRS1LQ9P0K9 344 aa12.27□□□□□ -0.45
CLK3-203ENST00000454830 PPIEQ9UNP9 301 aaKnown RBP12.27□□□□□ -0.45
CLK3-203ENST00000454830 A6NIZ1 184 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 TRAPPC6AO75865 159 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 RAP1BP61224 184 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 RAP1AP62834 184 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 CLPPQ16740 277 aaPredicted RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 PLET1Q6UQ28 207 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 LUZP2Q86TE4 346 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 TMPRSS12Q86WS5 348 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 LRRC28Q86X40 367 aaPredicted RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 PLCZ1Q86YW0 608 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 OR2G2Q8NGZ5 317 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 TMEM106AQ96A25 262 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 ZNF775Q96BV0 537 aaPredicted RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 PPP1R14BQ96C90 147 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 UBL7Q96S82 380 aaPredicted RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 GAL3ST1Q99999 423 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 KLHL13Q9P2N7 655 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 LIPT2A6NK58 231 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 EFNA2O43921 213 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 FZD7O75084 574 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 ZNF43P17038 809 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 RIDAP52758 137 aaKnown RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 ZNF544Q6NX49 715 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 MZT2BQ6NZ67 158 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 NDUFAF7Q7L592 441 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 LGALS14Q8TCE9 139 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 DDX28Q9NUL7 540 aaKnown RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 ALKBH4Q9NXW9 302 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 CDV3Q9UKY7 258 aaKnown RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 ADAMTS20P59510 1910 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 ZNF726A6NNF4 738 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 A8MV72 311 aaPredicted RBP12.26□□□□□ -0.45
CLK3-203ENST00000454830 FTCDNL1E5RQL4 147 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 PDCD5O14737 125 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 ACP1P24666 158 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 DNASE1L1P49184 302 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 YIF1BQ5BJH7 314 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 OR1J4Q8NGS1 313 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 ZNF519Q8TB69 540 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 CT55Q8WUE5 264 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 TCFL5Q9UL49 500 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 PCNX2A6NKB5 2137 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 EML6Q6ZMW3 1958 aa12.26□□□□□ -0.45
CLK3-203ENST00000454830 IGHV3-15A0A0B4J1V0 119 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 SEC14L5O43304 696 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 EPXP11678 715 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 Q499Y3 187 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 DCXRQ7Z4W1 244 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 PXKQ7Z7A4 578 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 GLCCI1Q86VQ1 547 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 ESX1Q8N693 406 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 OR51A4Q8NGJ6 313 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 NKX3-1Q99801 234 aaPredicted RBP12.25□□□□□ -0.45
CLK3-203ENST00000454830 ABHD6Q9BV23 337 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 NLKQ9UBE8 527 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 TRABD2BA6NFA1 517 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 PHYHO14832 338 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 GP1BAP07359 652 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 MAP2K3P46734 347 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 PITPNBP48739 271 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 RPS11P62280 158 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLK3-203ENST00000454830 CDC20Q12834 499 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 COMMD2Q86X83 199 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 WDSUB1Q8N9V3 476 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 IMMP1LQ96LU5 166 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 EDEM2Q9BV94 578 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 MRPL22Q9NWU5 206 aaKnown RBP12.25□□□□□ -0.45
CLK3-203ENST00000454830 FARSAQ9Y285 508 aaKnown RBP12.25□□□□□ -0.45
CLK3-203ENST00000454830 CHCHD2Q9Y6H1 151 aaPredicted RBP12.25□□□□□ -0.45
CLK3-203ENST00000454830 PHF3Q92576 2039 aaKnown RBP12.25□□□□□ -0.45
CLK3-203ENST00000454830 KHDRBS3O75525 346 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms