RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ZNF175Q9Y473 711 aa9.71□□□□□ -0.85
SCN9A-205ENST00000454569 A0A087WXM4 84 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 TRIM64A6NGJ6 449 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 TVP23AA6NH52 213 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 ATXN7O15265 892 aaPredicted RBP9.71□□□□□ -0.86
SCN9A-205ENST00000454569 MPZL2O60487 215 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 SLC19A2O60779 497 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 FAM20BO75063 409 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 IFNGP01579 166 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 YES1P07947 543 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 CCDC159P0C7I6 412 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 DBTP11182 482 aaKnown RBP9.71□□□□□ -0.86
SCN9A-205ENST00000454569 EDN3P14138 238 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 AGTR1P30556 359 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 GSTT1P30711 240 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 RPS27P42677 84 aaKnown RBP9.71□□□□□ -0.86
SCN9A-205ENST00000454569 CDH11P55287 796 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 SIRPAP78324 504 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 TSPO2Q5TGU0 170 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 VWA1Q6PCB0 445 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 AAED1Q7RTV5 226 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 P4HA3Q7Z4N8 544 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 LINC00528Q8N1L1 170 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 NOXO1Q8NFA2 376 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 OR4F15Q8NGB8 312 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 NSMAFQ92636 917 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 MCHR2Q969V1 340 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF566Q969W8 418 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 LGALS12Q96DT0 336 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 ZMYND19Q96E35 227 aaPredicted RBP9.71□□□□□ -0.86
SCN9A-205ENST00000454569 C12orf49Q9H741 205 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 PLCXD1Q9NUJ7 323 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 TAS2R16Q9NYV7 291 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 PRSS50Q9UI38 385 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 PSORS1C1Q9UIG5 152 aa9.71□□□□□ -0.86
SCN9A-205ENST00000454569 COA3Q9Y2R0 106 aaPredicted RBP9.71□□□□□ -0.86
SCN9A-205ENST00000454569 DPPA5A6NC42 116 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 CD8B2A6NJW9 211 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF726A6NNF4 738 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 ZNF724A8MTY0 619 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 M0R3G1 203 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 XKRYO14609 159 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 PRODHO43272 600 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 RENP00797 406 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 STSP08842 583 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 MRPL3P09001 348 aaKnown RBP9.7□□□□□ -0.86
SCN9A-205ENST00000454569 QDPRP09417 244 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 C21orf33P30042 268 aaPredicted RBP9.7□□□□□ -0.86
SCN9A-205ENST00000454569 HTR1FP30939 366 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 CDAP32320 146 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 KIR2DL2P43627 348 aaPredicted RBP9.7□□□□□ -0.86
SCN9A-205ENST00000454569 SLC25A1P53007 311 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 CLRN1P58418 232 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 CXCR4P61073 352 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 TUBA4AP68366 448 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 MRPL49Q13405 166 aaKnown RBP9.7□□□□□ -0.86
SCN9A-205ENST00000454569 RNPS1Q15287 305 aaKnown RBP9.7□□□□□ -0.86
SCN9A-205ENST00000454569 MEP1BQ16820 701 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 C1orf185Q5T7R7 199 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 SLC25A47Q6Q0C1 308 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 B3GNT6Q6ZMB0 384 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 AHSA2Q719I0 299 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 ZBTB46Q86UZ6 589 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 C20orf196Q8IYI0 205 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 TMEM45BQ96B21 275 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 DMRTB1Q96MA1 342 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 TEX12Q9BXU0 123 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 PRRG3Q9BZD7 231 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 NDEL1Q9GZM8 345 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 DUSP21Q9H596 190 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 SLC7A10Q9NS82 523 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 FKBP14Q9NWM8 211 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 MRPL22Q9NWU5 206 aaKnown RBP9.7□□□□□ -0.86
SCN9A-205ENST00000454569 SCN3BQ9NY72 215 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 GLTPQ9NZD2 209 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 KLHL9Q9P2J3 617 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 NOSIPQ9Y314 301 aaKnown RBP9.7□□□□□ -0.86
SCN9A-205ENST00000454569 TPRKBQ9Y3C4 175 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 UGT2A1Q9Y4X1 527 aa9.7□□□□□ -0.86
SCN9A-205ENST00000454569 MBD3L4A6NDZ8 208 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 MBD3L3A6NE82 208 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 A6NIZ1 184 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 MBD3L5A6NJ08 208 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 SELENOFO60613 162 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 SS18L1O75177 396 aaPredicted RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 IGHG1P01857 330 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 TFP02787 698 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 GLI4P10075 376 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 CD79BP40259 229 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 NR1H2P55055 460 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 RAP1BP61224 184 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 RPS7P62081 194 aaKnown RBP9.69□□□□□ -0.86
SCN9A-205ENST00000454569 RAP1AP62834 184 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 CSNK2BP67870 215 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 SLC35A2P78381 396 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 TEKQ02763 1124 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 MEDAGQ5VYS4 303 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 GTF2IRD2BQ6EKJ0 949 aa9.69□□□□□ -0.86
SCN9A-205ENST00000454569 ADCK1Q86TW2 530 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms