RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 UBL3O95164 117 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 SLC2A10O95528 541 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 CELA3BP08861 270 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF14P17017 642 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-205ENST00000454542 SDHAP31040 664 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ARR3P36575 388 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ACVR1BP36896 505 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 IFNGR2P38484 337 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ART1P52961 327 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ERVK-25P63136 954 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 MRPS34P82930 218 aaKnown RBP12.32□□□□□ -0.44
HDAC4-205ENST00000454542 MYBPC1Q00872 1141 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 NAAAQ02083 359 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 CD47Q08722 323 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 TSPAN31Q12999 210 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 KRR1Q13601 381 aaKnown RBP12.32□□□□□ -0.44
HDAC4-205ENST00000454542 GPR139Q6DWJ6 353 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 SMARCD3Q6STE5 483 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 DPY19L2P2Q6ZN68 376 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 LRRC75A-AS1Q8N1F1 130 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 SLC22A24Q8N4F4 322 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 CLDN22Q8N7P3 220 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 PAPD5Q8NDF8 572 aaKnown RBP12.32□□□□□ -0.44
HDAC4-205ENST00000454542 Q96M85 177 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF570Q96NI8 536 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 C1QTNF6Q9BXI9 259 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 OR52D1Q9H346 318 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 MMADHCQ9H3L0 296 aaPredicted RBP12.32□□□□□ -0.44
HDAC4-205ENST00000454542 TMCC3Q9ULS5 477 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 CELSR1Q9NYQ6 3014 aa12.32□□□□□ -0.44
HDAC4-205ENST00000454542 ARRDC5A6NEK1 342 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 E7EQL1 145 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 ATP6V1G2-DDX39BF2Z307 99 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 OVOL3O00110 214 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 HLA-HP01893 362 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 SOD3P08294 240 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 CALCRP30988 508 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 RPL4P36578 427 aaKnown RBP12.31□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF84P51523 738 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 GSG1Q2KHT4 349 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 RFX4Q33E94 735 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 THEM4Q5T1C6 240 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 C11orf71Q6IPW1 123 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 ASRGL1Q7L266 308 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 DPPA2Q7Z7J5 298 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 ADCK1Q86TW2 530 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 SKA3Q8IX90 412 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 FGFBP3Q8TAT2 258 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 GNPDA2Q8TDQ7 276 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-205ENST00000454542 CHID1Q9BWS9 393 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 DGCR6LQ9BY27 220 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 GSX2Q9BZM3 304 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 REEP1Q9H902 201 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF701Q9NV72 531 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-205ENST00000454542 VSX1Q9NZR4 365 aaPredicted RBP12.31□□□□□ -0.44
HDAC4-205ENST00000454542 SAMHD1Q9Y3Z3 626 aaKnown RBP12.31□□□□□ -0.44
HDAC4-205ENST00000454542 CDH10Q9Y6N8 788 aa12.31□□□□□ -0.44
HDAC4-205ENST00000454542 IGHV2OR16-5A0A0B4J2B6 119 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 TEX13CA0A0J9YWL9 993 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 SLC22A23A1A5C7 686 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 PRSS37A4D1T9 235 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 H7C1C5 153 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 IMPA2O14732 288 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 ARPC3O15145 178 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 CCNB2O95067 398 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 MMP7P09237 267 aaPredicted RBP12.3□□□□□ -0.44
HDAC4-205ENST00000454542 OR8G3PP0DMU2 310 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 SLC6A6P31641 620 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 IDH3GP51553 393 aaPredicted RBP12.3□□□□□ -0.44
HDAC4-205ENST00000454542 LCN6P62502 163 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 SLC22A25Q6T423 547 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 SPATA24Q86W54 205 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF584Q8IVC4 421 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 SMAP2Q8WU79 429 aaPredicted RBP12.3□□□□□ -0.44
HDAC4-205ENST00000454542 SLCO4A1Q96BD0 722 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 RASD2Q96D21 266 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 SNX18Q96RF0 628 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 DHRS9Q9BPW9 319 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
HDAC4-205ENST00000454542 GRHPRQ9UBQ7 328 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 FBXL3Q9UKT7 428 aa12.3□□□□□ -0.44
HDAC4-205ENST00000454542 ARHGEF9O43307 516 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 FKBP6O75344 327 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 FARS2O95363 451 aaKnown RBP12.29□□□□□ -0.44
HDAC4-205ENST00000454542 CD8AP01732 235 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 NPR2P20594 1047 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 CAPZA2P47755 286 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 GIPRP48546 466 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 PPP1R8Q12972 351 aaKnown RBP12.29□□□□□ -0.44
HDAC4-205ENST00000454542 MICAQ29983 383 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 RPL13AP3Q6NVV1 102 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 RASSF6Q6ZTQ3 369 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 PTCHD4Q6ZW05 846 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 AQP11Q8NBQ7 271 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 NUP37Q8NFH4 326 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 OR8D4Q8NGM9 314 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 HTRA1Q92743 480 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms