RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 ELAC2Q9BQ52 826 aaKnown RBP10.38□□□□□ -0.75
USP40-210ENST00000454354 PIMREGQ9BSJ6 248 aa10.38□□□□□ -0.75
USP40-210ENST00000454354 FNDC11Q9BVV2 318 aa10.38□□□□□ -0.75
USP40-210ENST00000454354 C1orf198Q9H425 327 aa10.38□□□□□ -0.75
USP40-210ENST00000454354 ANKRD19PQ9H560 264 aa10.38□□□□□ -0.75
USP40-210ENST00000454354 SLC7A8Q9UHI5 535 aa10.38□□□□□ -0.75
USP40-210ENST00000454354 ADAM21Q9UKJ8 722 aa10.38□□□□□ -0.75
USP40-210ENST00000454354 GMNCA6NCL1 334 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 J3KTA2 159 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 GSTA4O15217 222 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 SNX3O60493 162 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 SERPINA1P01009 418 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 MMP7P09237 267 aaPredicted RBP10.37□□□□□ -0.75
USP40-210ENST00000454354 PATE4P0C8F1 98 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 NR2C1P13056 603 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 MAKP20794 623 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 DRD4P21917 467 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 NR4A2P43354 598 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 YAP1P46937 504 aaKnown RBP10.37□□□□□ -0.75
USP40-210ENST00000454354 SLC9A3P48764 834 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 SEC24CP53992 1094 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 PSME3P61289 254 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 MRPS34P82930 218 aaKnown RBP10.37□□□□□ -0.75
USP40-210ENST00000454354 MYBPC1Q00872 1141 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 GALK2Q01415 458 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 LAPTM4AQ15012 233 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 SLC36A2Q495M3 483 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 ALG10Q5BKT4 473 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 FAM205BPQ63HN1 556 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 TMEM53Q6P2H8 277 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 SLC16A14Q7RTX9 510 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 RNF113BQ8IZP6 322 aaKnown RBP10.37□□□□□ -0.75
USP40-210ENST00000454354 LRRC75AQ8NAA5 344 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 SYT14Q8NB59 555 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 FAM156AQ8NDB6 213 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 HDAC2Q92769 488 aaKnown RBP10.37□□□□□ -0.75
USP40-210ENST00000454354 NABP1Q96AH0 204 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 KCTD14Q9BQ13 255 aaPredicted RBP10.37□□□□□ -0.75
USP40-210ENST00000454354 ALG12Q9BV10 488 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 MRPL37Q9BZE1 423 aaKnown RBP10.37□□□□□ -0.75
USP40-210ENST00000454354 DYNLRB1Q9NP97 96 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 YAE1D1Q9NRH1 226 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 TMEM160Q9NX00 188 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 RHCGQ9UBD6 479 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 UGT2A1Q9Y4X1 527 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 TANC2Q9HCD6 1990 aa10.37□□□□□ -0.75
USP40-210ENST00000454354 A0A087WUU8 490 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 IGKV1D-43A0A0B4J1Z2 117 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 SLC22A23A1A5C7 686 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 A8MV72 311 aaPredicted RBP10.36□□□□□ -0.75
USP40-210ENST00000454354 KIAA1324LA8MWY0 1029 aaPredicted RBP10.36□□□□□ -0.75
USP40-210ENST00000454354 SYNGR3O43761 229 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 SLC2A10O95528 541 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 SNAP29O95721 258 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 ERCC1P07992 297 aaPredicted RBP10.36□□□□□ -0.75
USP40-210ENST00000454354 IGHV4-31P0DP07 118 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 SAGP10523 405 aaPredicted RBP10.36□□□□□ -0.75
USP40-210ENST00000454354 GIFP27352 417 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 LSP1P33241 339 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 RPL27P61353 136 aaKnown RBP10.36□□□□□ -0.75
USP40-210ENST00000454354 FMODQ06828 376 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 SLC25A47Q6Q0C1 308 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 FOXL2NBQ6ZUU3 175 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 MBOAT2Q6ZWT7 520 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 TSEN54Q7Z6J9 526 aaKnown RBP10.36□□□□□ -0.75
USP40-210ENST00000454354 HIPK1Q86Z02 1210 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 SLC30A7Q8NEW0 376 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 ZNF519Q8TB69 540 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 FNDC8Q8TC99 324 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 TSPAN32Q96QS1 320 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 NSRP1Q9H0G5 558 aaKnown RBP10.36□□□□□ -0.75
USP40-210ENST00000454354 SIAEQ9HAT2 523 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 SPAG4Q9NPE6 437 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 ENPP4Q9Y6X5 453 aa10.36□□□□□ -0.75
USP40-210ENST00000454354 TRAV27A0A087WT01 109 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 M0R233 179 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 STAMBPO95630 424 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 PTHP01270 115 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 ADRA2AP08913 450 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 DAOP14920 347 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 NCK1P16333 377 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 CTXN1P60606 82 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 CD47Q08722 323 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 GGTLC2Q14390 218 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 THEM4Q5T1C6 240 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 GKAP1Q5VSY0 366 aaPredicted RBP10.35□□□□□ -0.75
USP40-210ENST00000454354 CYB5R2Q6BCY4 276 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 TMPRSS11FQ6ZWK6 438 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 FKBP9P1Q75LS8 142 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 OAFQ86UD1 273 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 CYP4Z1Q86W10 505 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 ZCCHC24Q8N2G6 241 aaKnown RBP10.35□□□□□ -0.75
USP40-210ENST00000454354 ZNF786Q8N393 782 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 PAQR4Q8N4S7 273 aaPredicted RBP10.35□□□□□ -0.75
USP40-210ENST00000454354 ZNF540Q8NDQ6 660 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 RBM15BQ8NDT2 890 aaKnown RBP10.35□□□□□ -0.75
USP40-210ENST00000454354 SLC7A13Q8TCU3 470 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 FAM162AQ96A26 154 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 FOXN4Q96NZ1 517 aa10.35□□□□□ -0.75
USP40-210ENST00000454354 NMNAT1Q9HAN9 279 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms