RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PRSS23O95084 383 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 FARS2O95363 451 aaKnown RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 SLC2A10O95528 541 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 ERCC1P07992 297 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 MMP7P09237 267 aaPredicted RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 FAM157CP0CG43 387 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 APEHP13798 732 aaKnown RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF23P17027 643 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 SLC7A2P52569 658 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 RPS23P62266 143 aaKnown RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 GALK2Q01415 458 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 LIPEQ05469 1076 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 FHL1Q13642 323 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 RIN1Q13671 783 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 CXXC5Q7LFL8 322 aaKnown RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 DPPA2Q7Z7J5 298 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 LRP11Q86VZ4 500 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF540Q8NDQ6 660 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 SLC30A7Q8NEW0 376 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 LZICQ8WZA0 190 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 HDAC2Q92769 488 aaKnown RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 NABP1Q96AH0 204 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 BPIFA2Q96DR5 249 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 KCNK17Q96T54 332 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 SYT3Q9BQG1 590 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 TPK1Q9H3S4 243 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 SMURF2Q9HAU4 748 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 STX18Q9P2W9 335 aaKnown RBP10.72□□□□□ -0.69
CPSF4-208ENST00000452047 UGT2A1Q9Y4X1 527 aa10.72□□□□□ -0.69
CPSF4-208ENST00000452047 HTR3EA5X5Y0 456 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 CXCR6O00574 342 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 LMX1BO60663 402 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 CCDC22O60826 627 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 LILRA1O75019 489 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 SNAP29O95721 258 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 IGHMP01871 453 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 IFNW1P05000 195 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 TACSTD2P09758 323 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 IFI30P13284 250 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 CCL2P13500 99 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 MAKP20794 623 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 IGFBP5P24593 272 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 ALDH3B1P43353 468 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 YAP1P46937 504 aaKnown RBP10.71□□□□□ -0.69
CPSF4-208ENST00000452047 GSK3BP49841 420 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 ZNF84P51523 738 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 MRPS34P82930 218 aaKnown RBP10.71□□□□□ -0.69
CPSF4-208ENST00000452047 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
CPSF4-208ENST00000452047 FMODQ06828 376 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 MAD2L1BPQ15013 274 aaPredicted RBP10.71□□□□□ -0.69
CPSF4-208ENST00000452047 SLC36A2Q495M3 483 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 IQCCQ4KMZ1 466 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 ALG10Q5BKT4 473 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 ELFN2Q5R3F8 820 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 GKAP1Q5VSY0 366 aaPredicted RBP10.71□□□□□ -0.69
CPSF4-208ENST00000452047 TMEM53Q6P2H8 277 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 PODNL1Q6PEZ8 512 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 HACD2Q6Y1H2 254 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 CBLL1Q75N03 491 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 SLC16A14Q7RTX9 510 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 NRMQ8IXM6 262 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 LRRC75AQ8NAA5 344 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 UBASH3BQ8TF42 649 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 GEMIN6Q8WXD5 167 aaKnown RBP10.71□□□□□ -0.69
CPSF4-208ENST00000452047 HOPXQ9BPY8 73 aaPredicted RBP10.71□□□□□ -0.69
CPSF4-208ENST00000452047 SOX7Q9BT81 388 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 TXNIPQ9H3M7 391 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 MS4A5Q9H3V2 200 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 C1orf198Q9H425 327 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 FAM53CQ9NYF3 392 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 RHCGQ9UBD6 479 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 REV1Q9UBZ9 1251 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 FZR1Q9UM11 496 aa10.71□□□□□ -0.69
CPSF4-208ENST00000452047 LRP5LA4QPB2 252 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 LYNX1G3V0Z9 82 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 MGRN1O60291 552 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 ZNF682O95780 498 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 LYNX1P0DP58 116 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 IL2RGP31785 369 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 CDAP32320 146 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 LSP1P33241 339 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 NUDT2P50583 147 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 SEC24CP53992 1094 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 RPL27P61353 136 aaKnown RBP10.7□□□□□ -0.7
CPSF4-208ENST00000452047 PRKCDQ05655 676 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 CD47Q08722 323 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 TRAM2Q15035 370 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 TAF11Q15544 211 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 IFI44LQ53G44 452 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 FAM166AQ6J272 317 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 SLC25A47Q6Q0C1 308 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 TSEN54Q7Z6J9 526 aaKnown RBP10.7□□□□□ -0.7
CPSF4-208ENST00000452047 MEX3DQ86XN8 651 aaKnown RBP10.7□□□□□ -0.7
CPSF4-208ENST00000452047 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 CLDN22Q8N7P3 220 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 ARIH2OSQ8N7S6 290 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 RBM15BQ8NDT2 890 aaKnown RBP10.7□□□□□ -0.7
CPSF4-208ENST00000452047 ZNF519Q8TB69 540 aa10.7□□□□□ -0.7
CPSF4-208ENST00000452047 ALG12Q9BV10 488 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms