RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CASP12Q6UXS9 341 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 ZNF620Q6ZNG0 422 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 C8orf59Q8N0T1 100 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 LRRC75A-AS1Q8N1F1 130 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 ZNF611Q8N823 705 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 DGCR14Q96DF8 476 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 OXGR1Q96P68 337 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 SF3B5Q9BWJ5 86 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 OR52D1Q9H346 318 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 ESRP2Q9H6T0 727 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 VCX3AQ9NNX9 186 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 NGBQ9NPG2 151 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 IL20Q9NYY1 176 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 BLOC1S6Q9UL45 172 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 FLVCR1Q9Y5Y0 555 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 VPS13CQ709C8 3753 aa14.97□□□□□ -0.01
PRPF40A-204ENST00000450303 USF3Q68DE3 2245 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 A0A1W2PR80 420 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 CCDC160A6NGH7 325 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 C11orf98E9PRG8 122 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 SNAP29O95721 258 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 TSPAN19P0C672 248 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 FOSL1P15407 271 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 COX5AP20674 150 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 POU1F1P28069 291 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 AQP2P41181 271 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 PTH2RP49190 550 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 CRISP1P54107 249 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 RPS4XP62701 263 aaKnown RBP14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 RPL18Q07020 188 aaKnown RBP14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 BSPH1Q075Z2 132 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 C1DQ13901 141 aaKnown RBP14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 SLC17A1Q14916 467 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 USP51Q70EK9 711 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 Q71RC1 249 aaPredicted RBP14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 UEVLDQ8IX04 471 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 SETD9Q8NE22 299 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 ANKK1Q8NFD2 765 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 KBTBD8Q8NFY9 601 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 TMEM171Q8WVE6 324 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 IGFBPL1Q8WX77 278 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 MUCL1Q96DR8 90 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 Q96MF0 132 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 USB1Q9BQ65 265 aaKnown RBP14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 GRIP2Q9C0E4 1043 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 INIPQ9NRY2 104 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 TBC1D23Q9NUY8 699 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 REV1Q9UBZ9 1251 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 TMEFF2Q9UIK5 374 aaPredicted RBP14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 BAIAP2Q9UQB8 552 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 LAMP3Q9UQV4 416 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 NOX1Q9Y5S8 564 aa14.96□□□□□ -0.01
PRPF40A-204ENST00000450303 LOC102725191A0A1B0GVB3 256 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 A0A1W2PRG6 482 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 MS4A18H0YCH9 400 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 MITFO75030 526 aaPredicted RBP14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 CNOT4O95628 575 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 ZNF43P17038 809 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 MS4A18Q3C1V0 323 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 RBM48Q5RL73 367 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 TIMM23BQ5SRD1 257 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 ADAM5Q6NVV9 412 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 DPY19L2P2Q6ZN68 376 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 THAP5Q7Z6K1 395 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 PXKQ7Z7A4 578 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 GPAT4Q86UL3 456 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 SATL1Q86VE3 508 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 OR52N5Q8NH56 324 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 C18orf12Q96KH6 178 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 SAMD8Q96LT4 415 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 TSSK6Q9BXA6 273 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 TOR3AQ9H497 397 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 RIBC2Q9H4K1 309 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 EGLN3Q9H6Z9 239 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 SLC7A10Q9NS82 523 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 ASB6Q9NWX5 421 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 TAS2R5Q9NYW4 299 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 NPAP1Q9NZP6 1156 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 UPB1Q9UBR1 384 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 COMMD3-BMI1R4GMX3 469 aa14.95□□□□□ -0.02
PRPF40A-204ENST00000450303 OR5H1A6NKK0 313 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 AKAP8O43823 692 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 SOX14O95416 240 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 TFAP2AP05549 437 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 TTKP33981 857 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 CTXN1P60606 82 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 NPRL3Q12980 569 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 CNPY1Q3B7I2 92 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 ZIK1Q3SY52 487 aaPredicted RBP14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 TSPO2Q5TGU0 170 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 HDDC2Q7Z4H3 204 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 CIARTQ8N365 385 aaPredicted RBP14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 ZIC4Q8N9L1 334 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 OR2T33Q8NG76 320 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 OR9K2Q8NGE7 335 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 MOSPD2Q8NHP6 518 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 ZNF385AQ96PM9 386 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 GPX7Q96SL4 187 aaPredicted RBP14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 IFT27Q9BW83 186 aa14.94□□□□□ -0.02
PRPF40A-204ENST00000450303 C1QTNF6Q9BXI9 259 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms