RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 POM121BA6NF01 834 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 NPIPA5E9PKD4 350 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 STK17BO94768 372 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 OR13C7P0DN81 318 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 ADH6P28332 368 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 RPS15AP62244 130 aaKnown RBP11.33□□□□□ -0.6
UBE3B-204ENST00000449510 KIRREL2Q6UWL6 708 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 RNF165Q6ZSG1 346 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 OVCH1Q7RTY7 1134 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 UBE3DQ7Z6J8 389 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 ZAR1Q86SH2 424 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 RNF113BQ8IZP6 322 aaKnown RBP11.33□□□□□ -0.6
UBE3B-204ENST00000449510 ZNF565Q8N9K5 539 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 OR14K1Q8NGZ2 314 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 VN1R3Q9BXE9 311 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 WDR76Q9H967 626 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 NPIPA1Q9UND3 350 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 VDAC3Q9Y277 283 aa11.33□□□□□ -0.6
UBE3B-204ENST00000449510 DNAJB6O75190 326 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 CRTAPO75718 401 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-204ENST00000449510 TGM6O95932 706 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 RECKO95980 971 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 ZGLP1P0C6A0 271 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 PSMA3P25788 255 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 EFNB2P52799 333 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 ACY1Q03154 408 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 KLF9Q13886 244 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-204ENST00000449510 ZNF674Q2M3X9 581 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 OR2L8Q8NGY9 312 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 C10orf90Q96M02 699 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 TCEAL2Q9H3H9 227 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-204ENST00000449510 STEAP1Q9UHE8 339 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 A0A087WV48 116 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 TRBV23-1A0A0A0MS06 115 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 P2RY10O00398 339 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 AHSA1O95433 338 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 LY86O95711 162 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 IGFALSP35858 605 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 SERPINF1P36955 418 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 EIF5AP63241 154 aaKnown RBP11.32□□□□□ -0.6
UBE3B-204ENST00000449510 SLC18B1Q6NT16 456 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 WDR88Q6ZMY6 472 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 TCTEX1D2Q8WW35 142 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 ZNF578Q96N58 590 aaPredicted RBP11.32□□□□□ -0.6
UBE3B-204ENST00000449510 ZFYVE21Q9BQ24 234 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 PIGMQ9H3S5 423 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 PRDM7Q9NQW5 492 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 TAS2R4Q9NYW5 299 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 MEMO1Q9Y316 297 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 DOCK6Q96HP0 2047 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 LAMA3Q16787 3333 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 H7C1Q1 480 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 RNGTTO60942 597 aaKnown RBP11.32□□□□□ -0.6
UBE3B-204ENST00000449510 H2BFSP57053 126 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 C2orf68Q2NKX9 166 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 CHRFAM7AQ494W8 412 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 CLEC9AQ6UXN8 241 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
UBE3B-204ENST00000449510 HHIPQ96QV1 700 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 KCNJ16Q9NPI9 418 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 FOXJ3Q9UPW0 622 aa11.32□□□□□ -0.6
UBE3B-204ENST00000449510 SYT7O43581 403 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 NME2P1O60361 137 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 VSIG10L2P0DP72 767 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 GP1BBP13224 206 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 NME1P15531 152 aaKnown RBP11.31□□□□□ -0.6
UBE3B-204ENST00000449510 DIO1P49895 249 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 CAV2P51636 162 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 EMP2P54851 167 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 RUNX2Q13950 521 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 PWWP2BQ6NUJ5 590 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 PXKQ7Z7A4 578 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 BATF2Q8N1L9 274 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 GVQW1Q8N7I0 195 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 OR5M9Q8NGP3 310 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 JSRP1Q96MG2 331 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-204ENST00000449510 LDAHQ9H6V9 325 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 C14orf166Q9Y224 244 aaKnown RBP11.31□□□□□ -0.6
UBE3B-204ENST00000449510 FBXO7Q9Y3I1 522 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 TET1Q8NFU7 2136 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 SPP1P10451 314 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 NDUFA6P56556 154 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 RPS15P62841 145 aaKnown RBP11.31□□□□□ -0.6
UBE3B-204ENST00000449510 TRA2BP62995 288 aaKnown RBP11.31□□□□□ -0.6
UBE3B-204ENST00000449510 ZNF704Q6ZNC4 412 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-204ENST00000449510 SEMA6DQ8NFY4 1073 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 OR52H1Q8NGJ2 320 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 MARCH1Q8TCQ1 289 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 RNF141Q8WVD5 230 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 MIB2Q96AX9 1013 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 FGGYQ96C11 551 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 ADAM29Q9UKF5 820 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 EXOGQ9Y2C4 368 aaKnown RBP11.31□□□□□ -0.6
UBE3B-204ENST00000449510 ZNF337Q9Y3M9 751 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 TRAV8-7A0A075B6U6 113 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 TRIM77I1YAP6 450 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 MAOAP21397 527 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 PRPS1P60891 318 aa11.31□□□□□ -0.6
UBE3B-204ENST00000449510 FAM26DQ5JW98 314 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms