RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 LRRC18Q8N456 261 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 LINC01356Q8N9X3 169 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 TMEM239Q8WW34 195 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 MRPL13Q9BYD1 178 aaKnown RBP11.77□□□□□ -0.53
TOM1-211ENST00000449508 POLR2J2Q9GZM3 115 aaKnown RBP11.77□□□□□ -0.53
TOM1-211ENST00000449508 POLR2J3Q9H1A7 115 aaKnown RBP11.77□□□□□ -0.53
TOM1-211ENST00000449508 SAR1AQ9NR31 198 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 INIPQ9NRY2 104 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 C20orf141Q9NUB4 165 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 GID8Q9NWU2 228 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 MED31Q9Y3C7 131 aa11.77□□□□□ -0.53
TOM1-211ENST00000449508 IQCMA0A1B0GVH7 501 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 A0A1W2PPW3 197 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 SLC22A23A1A5C7 686 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 TRMUO75648 421 aaKnown RBP11.76□□□□□ -0.53
TOM1-211ENST00000449508 LCKP06239 509 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 NAT2P11245 290 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 ACADSP16219 412 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 KDELR2P33947 212 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 DAP3P51398 398 aaKnown RBP11.76□□□□□ -0.53
TOM1-211ENST00000449508 SELENOVP59797 346 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 CCNIQ14094 377 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 ALKBH6Q3KRA9 238 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 LRRC23Q53EV4 343 aaPredicted RBP11.76□□□□□ -0.53
TOM1-211ENST00000449508 CYBRD1Q53TN4 286 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 ELFN2Q5R3F8 820 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 UGT2A3Q6UWM9 527 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 HDDC2Q7Z4H3 204 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 PAQR4Q8N4S7 273 aaPredicted RBP11.76□□□□□ -0.53
TOM1-211ENST00000449508 PCYOX1LQ8NBM8 494 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 OR1J2Q8NGS2 313 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 MOSPD2Q8NHP6 518 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 ASB10Q8WXI3 467 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 RDH5Q92781 318 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 TPD52L3Q96J77 140 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 LRMDAQ9H2I8 198 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 KCNN2Q9H2S1 579 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 OR51B6Q9H340 312 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 C1orf198Q9H425 327 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 FGFR1OP2Q9NVK5 253 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 TAAR3PQ9P1P4 343 aa11.76□□□□□ -0.53
TOM1-211ENST00000449508 TMEFF2Q9UIK5 374 aaPredicted RBP11.76□□□□□ -0.53
TOM1-211ENST00000449508 ZNF346Q9UL40 294 aaKnown RBP11.76□□□□□ -0.53
TOM1-211ENST00000449508 CENPBD1B2RD01 187 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 CLPTM1O96005 669 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 IGF2P01344 180 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 THRBP10828 461 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 ACHEP22303 614 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 RAD52P43351 418 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 GPR6P46095 362 aaPredicted RBP11.75□□□□□ -0.53
TOM1-211ENST00000449508 CDH15P55291 814 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 NKPD1Q17RQ9 610 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 TBC1D28Q2M2D7 210 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 NRN1LQ496H8 165 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 ICA1LQ8NDH6 482 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 RBM15BQ8NDT2 890 aaKnown RBP11.75□□□□□ -0.53
TOM1-211ENST00000449508 NOXO1Q8NFA2 376 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 SYNPRQ8TBG9 265 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 LIPHQ8WWY8 451 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 C11orf40Q8WZ69 217 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 SIAEQ9HAT2 523 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 STX18Q9P2W9 335 aaKnown RBP11.75□□□□□ -0.53
TOM1-211ENST00000449508 GPR160Q9UJ42 338 aa11.75□□□□□ -0.53
TOM1-211ENST00000449508 MGRN1O60291 552 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 SLC2A10O95528 541 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 TSPAN19P0C672 248 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 CDAP32320 146 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 IFNA8P32881 189 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 APLNRP35414 380 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 SRP14P37108 136 aaKnown RBP11.74□□□□□ -0.53
TOM1-211ENST00000449508 UCP2P55851 309 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 TMEM33P57088 247 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 KLF3P57682 345 aaPredicted RBP11.74□□□□□ -0.53
TOM1-211ENST00000449508 ERVS71-1P61550 626 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 SELENOWP63302 87 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
TOM1-211ENST00000449508 HSF2Q03933 536 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 ST3GAL3Q11203 375 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 SGCAQ16586 387 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 C10orf128Q5T292 105 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 ARMC4Q5T2S8 1044 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 CGB2Q6NT52 195 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 TMEM154Q6P9G4 183 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 OR2T12Q8NG77 320 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 ZNF519Q8TB69 540 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 YIPF5Q969M3 257 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 SEPHS2Q99611 448 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 BCL2L14Q9BZR8 327 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 TXNIPQ9H3M7 391 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 NARFLQ9H6Q4 476 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 CCNB1IP1Q9NPC3 277 aa11.74□□□□□ -0.53
TOM1-211ENST00000449508 ELOVL7A1L3X0 281 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 FAM220BPB1ANY3 271 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 B4DSR2 109 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 PPIHO43447 177 aaKnown RBP11.73□□□□□ -0.53
TOM1-211ENST00000449508 PIP5K1CO60331 668 aa11.73□□□□□ -0.53
TOM1-211ENST00000449508 NCR1O76036 304 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms