RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 OSGIN2Q9Y236 505 aa12.94□□□□□ -0.34
TNF-208ENST00000449264 RPL36Q9Y3U8 105 aaKnown RBP12.94□□□□□ -0.34
TNF-208ENST00000449264 FKBP7Q9Y680 259 aa12.94□□□□□ -0.34
TNF-208ENST00000449264 IGLV1-36A0A0B4J1U3 117 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 EIF4E1BA6NMX2 242 aaKnown RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 PTGES3LE9PB15 166 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 GLCEO94923 617 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 TNFAIP8O95379 198 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 HLA-DQA2P01906 255 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 PRB1P04280 392 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 CCDC159P0C7I6 412 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 GLI4P10075 376 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 CRHBPP24387 322 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 EEF1B2P24534 225 aaKnown RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 MTNR1AP48039 350 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 CXCR4P61073 352 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 PMPCAQ10713 525 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 GUSBP1Q15486 140 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 HIST3H3Q16695 136 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 TSPO2Q5TGU0 170 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 OTPQ5XKR4 325 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 VWA1Q6PCB0 445 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 ZBTB46Q86UZ6 589 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 UBE2J2Q8N2K1 259 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 OR51G2Q8NGK0 314 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 FNDC8Q8TC99 324 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 SGCDQ92629 289 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 NMD3Q96D46 503 aaKnown RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 NR1H4Q96RI1 486 aaPredicted RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 TEAD3Q99594 435 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 RACGAP1Q9H0H5 632 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 B3GAT2Q9NPZ5 323 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 WARS2Q9UGM6 360 aaKnown RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 COA3Q9Y2R0 106 aaPredicted RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 MYO7BQ6PIF6 2116 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 TVP23AA6NH52 213 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 KHDRBS3O75525 346 aaKnown RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 TIMP3P35625 211 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 ATP6V1E1P36543 226 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 NAA10P41227 235 aaPredicted RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 KIR2DL2P43627 348 aaPredicted RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 SLC35D3Q5M8T2 416 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 LINC01590Q5TEZ4 76 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 LRFN4Q6PJG9 635 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 HTRA1Q92743 480 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 RBM24Q9BX46 236 aaKnown RBP12.93□□□□□ -0.34
TNF-208ENST00000449264 CRLF2Q9HC73 371 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 SLC7A10Q9NS82 523 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 UPB1Q9UBR1 384 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 PRSS50Q9UI38 385 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
TNF-208ENST00000449264 ESPL1Q14674 2120 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 SELENOFO60613 162 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 STSP08842 583 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 CDAP32320 146 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 TLE1Q04724 770 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 GLO1Q04760 184 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 PIGFQ07326 219 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 SLC25A47Q6Q0C1 308 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 LINGO2Q7L985 606 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 ERI1Q8IV48 349 aaKnown RBP12.92□□□□□ -0.34
TNF-208ENST00000449264 ZNF511Q8NB15 262 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 OR4F15Q8NGB8 312 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 OR6K3Q8NGY3 331 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 GGHQ92820 318 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 ZFP3Q96NJ6 502 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 COPS4Q9BT78 406 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 SEC61A2Q9H9S3 476 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 PLCXD1Q9NUJ7 323 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 PAK1IP1Q9NWT1 392 aaPredicted RBP12.92□□□□□ -0.34
TNF-208ENST00000449264 PSORS1C1Q9UIG5 152 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 MOKQ9UQ07 419 aa12.92□□□□□ -0.34
TNF-208ENST00000449264 EFCAB10A6NFE3 127 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 OR6C65A6NJZ3 312 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 ZNF587BE7ETH6 402 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 DHHO43323 396 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 TNFSF13O75888 250 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 SEC14L2O76054 403 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 CA7P43166 264 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 OR3A2P47893 321 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 ZNF84P51523 738 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 CDH15P55291 814 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 CSNK2BP67870 215 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 ROR2Q01974 943 aaKnown RBP12.91□□□□□ -0.34
TNF-208ENST00000449264 FAPQ12884 760 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 MEP1BQ16820 701 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 EIF2S3LQ2VIR3 472 aaKnown RBP12.91□□□□□ -0.34
TNF-208ENST00000449264 CEACAM16Q2WEN9 425 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 C10orf128Q5T292 105 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 C9orf135Q5VTT2 229 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 TFAP2EQ6VUC0 442 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 GLB1L2Q8IW92 636 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 POMGNT2Q8NAT1 580 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 ZNF837Q96EG3 531 aaPredicted RBP12.91□□□□□ -0.34
TNF-208ENST00000449264 CNN2Q99439 309 aaKnown RBP12.91□□□□□ -0.34
TNF-208ENST00000449264 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 GPR35Q9HC97 309 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 PROCRQ9UNN8 238 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms