RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 UGT2A3Q6UWM9 527 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 MEPCEQ7L2J0 689 aaKnown RBP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 ZNF100Q8IYN0 542 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 GPR137CQ8N3F9 429 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 KISS1RQ969F8 398 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 SFXN3Q9BWM7 321 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 OR51V1Q9H2C8 321 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 C12orf49Q9H741 205 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 PLCXD1Q9NUJ7 323 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 MOKQ9UQ07 419 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 COMMD3-BMI1R4GMX3 469 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 DOCK7Q96N67 2140 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 PHF3Q92576 2039 aaKnown RBP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 SLC22A31A6NKX4 558 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 SNTNA6NMZ2 147 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 KHDRBS3O75525 346 aaKnown RBP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 GLCEO94923 617 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 NUDT6P53370 316 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 TMED1Q13445 227 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 LSAMPQ13449 338 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 KLHL12Q53G59 568 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 SOWAHCQ53LP3 525 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 LINC01590Q5TEZ4 76 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 TMEM211Q6ICI0 200 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 LINGO2Q7L985 606 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 PROKR2Q8NFJ6 384 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 STARD4Q96DR4 205 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 TEAD3Q99594 435 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 ULBP2Q9BZM5 246 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 B3GAT2Q9NPZ5 323 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 SLC7A10Q9NS82 523 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 WARS2Q9UGM6 360 aaKnown RBP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHMT2-203ENST00000449049 MED12LQ86YW9 2145 aa12.41□□□□□ -0.42
SHMT2-203ENST00000449049 HSPB2A8KAH6 182 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 RPL36A-HNRNPH2H7BZ11 118 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 SLC1A7O00341 560 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 CGAP01215 116 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 CTSSP25774 331 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 PYCR1P32322 319 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 SH3BGRP55822 239 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-203ENST00000449049 CSNK2BP67870 215 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 ZNF91Q05481 1191 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 STK11Q15831 433 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 HSPB2Q16082 182 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 ETFDHQ16134 617 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 ZNF786Q8N393 782 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 OR51L1Q8NGJ5 315 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 ALKBH3Q96Q83 286 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-203ENST00000449049 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 HAO2Q9NYQ3 351 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 MALT1Q9UDY8 824 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 PRSS50Q9UI38 385 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 CACNA1BQ00975 2339 aa12.4□□□□□ -0.42
SHMT2-203ENST00000449049 A0A0G2JNJ9 132 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 DHHO43323 396 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 IL18BPO95998 194 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 CCDC159P0C7I6 412 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 DBTP11182 482 aaKnown RBP12.4□□□□□ -0.43
SHMT2-203ENST00000449049 SLC15A1P46059 708 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 CENPAP49450 140 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 RPS7P62081 194 aaKnown RBP12.4□□□□□ -0.43
SHMT2-203ENST00000449049 GGTLC2Q14390 218 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 RBM48Q5RL73 367 aaKnown RBP12.4□□□□□ -0.43
SHMT2-203ENST00000449049 LCN1P1Q5VSP4 162 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 FBXW9Q5XUX1 488 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 FOXL2NBQ6ZUU3 175 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 NCCRP1Q6ZVX7 275 aaPredicted RBP12.4□□□□□ -0.43
SHMT2-203ENST00000449049 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 BPIFB6Q8NFQ5 453 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 RERGLQ9H628 205 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 GPR35Q9HC97 309 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 Q9UFV3 132 aa12.4□□□□□ -0.43
SHMT2-203ENST00000449049 COA3Q9Y2R0 106 aaPredicted RBP12.4□□□□□ -0.43
SHMT2-203ENST00000449049 RPL36Q9Y3U8 105 aaKnown RBP12.4□□□□□ -0.43
SHMT2-203ENST00000449049 FAM171A2A8MVW0 826 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 XPNPEP2O43895 674 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 CNOT4O95628 575 aaKnown RBP12.39□□□□□ -0.43
SHMT2-203ENST00000449049 IGHV3-9P01782 118 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 CD8BP10966 210 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 BLVRAP53004 296 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 OR6K6Q8NGW6 343 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 NSMAFQ92636 917 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 YTHDF1Q9BYJ9 559 aaKnown RBP12.39□□□□□ -0.43
SHMT2-203ENST00000449049 CRLF2Q9HC73 371 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 AMBNQ9NP70 447 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 MRPS18AQ9NVS2 196 aaKnown RBP12.39□□□□□ -0.43
SHMT2-203ENST00000449049 PROCRQ9UNN8 238 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 UGT2A1Q9Y4X1 527 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 ATRXP46100 2492 aa12.39□□□□□ -0.43
SHMT2-203ENST00000449049 ZNF587BE7ETH6 402 aa12.38□□□□□ -0.43
SHMT2-203ENST00000449049 FAM20BO75063 409 aa12.38□□□□□ -0.43
SHMT2-203ENST00000449049 KRT33AO76009 404 aa12.38□□□□□ -0.43
SHMT2-203ENST00000449049 GAAP10253 952 aa12.38□□□□□ -0.43
SHMT2-203ENST00000449049 CRHBPP24387 322 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms