RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TMPRSS12Q86WS5 348 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 RFLNBQ8N5W9 214 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 PARP16Q8N5Y8 322 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 YIPF7Q8N8F6 280 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 SYT14Q8NB59 555 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 OTOSQ8NHW6 89 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 RPS4Y2Q8TD47 263 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 KCNE4Q8WWG9 221 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 THRSPQ92748 146 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 KIAA1143Q96AT1 154 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 THOC3Q96J01 351 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 JSRP1Q96MG2 331 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 OXGR1Q96P68 337 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 TTYH2Q9BSA4 534 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 NAA11Q9BSU3 229 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 CCDC32Q9BV29 185 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 PROK2Q9HC23 129 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 PARD6AQ9NPB6 346 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 ACOXLQ9NUZ1 547 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 PLEKHB1Q9UF11 243 aaPredicted RBP9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 IKZF2Q9UKS7 526 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 RASD1Q9Y272 281 aa9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 MRPS18CQ9Y3D5 142 aaKnown RBP9.47□□□□□ -0.89
VIPAS39-203ENST00000448935 TRAV1-2A0A0B4J238 106 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF879B4DU55 563 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF593O00488 134 aaPredicted RBP9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 CTDSP2O14595 271 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 SMAD7O15105 426 aaKnown RBP9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 EFSO43281 561 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 DNPH1O43598 174 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 TLX3O43711 291 aaPredicted RBP9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 TMEM127O75204 238 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 UPK1BO75841 260 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF432O94892 652 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 VAMP5O95183 116 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 CLEC2LP0C7M8 214 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 HLA-DOBP13765 273 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF823P16415 610 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 RBMS1P29558 406 aaKnown RBP9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 TNFSF8P32971 234 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 RAC1P63000 192 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 DBPQ10586 325 aaPredicted RBP9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ATP1A4Q13733 1029 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 YIF1BQ5BJH7 314 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ABHD17BQ5VST6 288 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 LYPD4Q6UWN0 246 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 RPTNQ6XPR3 784 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 DPY19L4Q7Z388 723 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 IL22RA1Q8N6P7 574 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 CHPT1Q8WUD6 406 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 THEM6Q8WUY1 208 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 GNRHR2Q96P88 292 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 TTTY10Q9BZA0 68 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 STMN3Q9NZ72 180 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 KLHL9Q9P2J3 617 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF281Q9Y2X9 895 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 GRIP1Q9Y3R0 1128 aa9.46□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF318Q5VUA4 2279 aa9.46□□□□□ -0.9
VIPAS39-203ENST00000448935 LOC101059948A0A1B0GTJ6 334 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OR2M5A3KFT3 312 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 AQP7P3A6NL99 342 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 FIGNL2A6NMB9 653 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 LRRTM2O43300 516 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 TMCC2O75069 709 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 IGHG1P01857 330 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 HRGP04196 525 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 FTH1P19P0C7X4 201 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 CTLA4P16410 223 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ZNF43P17038 809 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 CNR1P21554 472 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 MAPK3P27361 379 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 SFTPDP35247 375 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 BIDP55957 195 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ADAM8P78325 824 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PRR20EP86478 221 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PRR20CP86479 221 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PRR20DP86480 221 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PRR20BP86481 221 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PRR20AP86496 221 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OC90Q02509 493 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 RASGEF1BQ0VAM2 473 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ALKBH1Q13686 389 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ZMAT1Q5H9K5 638 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 TEX30Q5JUR7 227 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 THEM4Q5T1C6 240 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 LIPNQ5VXI9 398 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 B3GNTL1Q67FW5 361 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 Q6ZNX1 250 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 BEST3Q8N1M1 668 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 KDM8Q8N371 416 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 DEFB124Q8NES8 71 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ADAMTS17Q8TE56 1095 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PSMF1Q92530 271 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 SLC25A44Q96H78 314 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 DCLRE1CQ96SD1 692 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 MROQ9BYG7 248 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 COMMD4Q9H0A8 199 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 TMEM185BQ9H7F4 350 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 MRM2Q9UI43 246 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 DAPK2Q9UIK4 370 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms