RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 DNAJB9Q9UBS3 223 aa11.65□□□□□ -0.54
SNHG4-201ENST00000448190 MOKQ9UQ07 419 aa11.65□□□□□ -0.54
SNHG4-201ENST00000448190 SPG11Q96JI7 2443 aa11.65□□□□□ -0.55
SNHG4-201ENST00000448190 ARPC4-TTLL3A0A0A6YYG9 625 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 SLC22A23A1A5C7 686 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 PRSS37A4D1T9 235 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 NPIPB13A6NJU9 1138 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 SHISA9B4DS77 424 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 NPIPB4C9JG80 1138 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 SOX14O95416 240 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 SCG5P05408 212 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 OR8G3PP0DMU2 310 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 HOXB1P14653 301 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-201ENST00000448190 CBR1P16152 277 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 DNASE1P24855 282 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 PTAFRP25105 342 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 SLC6A6P31641 620 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 GIPRP48546 466 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
SNHG4-201ENST00000448190 ZNF84P51523 738 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 RPS6KA3P51812 740 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 RAB1AP62820 205 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 KRR1Q13601 381 aaKnown RBP11.64□□□□□ -0.55
SNHG4-201ENST00000448190 THEM4Q5T1C6 240 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 PTCHD4Q6ZW05 846 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 FAM122BQ7Z309 247 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 AMIGO2Q86SJ2 522 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 LINC00471Q8N535 108 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 OR4K13Q8NH42 304 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 SLC38A2Q96QD8 506 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 NIPSNAP1Q9BPW8 284 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 PLA2G12AQ9BZM1 189 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 NDEL1Q9GZM8 345 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 DENND2DQ9H6A0 471 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-201ENST00000448190 YY1AP1Q9H869 796 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 RNF121Q9H920 327 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 NTN4Q9HB63 628 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 CISD1Q9NZ45 108 aaKnown RBP11.64□□□□□ -0.55
SNHG4-201ENST00000448190 ZNF224Q9NZL3 707 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 STX18Q9P2W9 335 aaKnown RBP11.64□□□□□ -0.55
SNHG4-201ENST00000448190 POU2F3Q9UKI9 436 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 UGT2A1Q9Y4X1 527 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 ATP23Q9Y6H3 246 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 PRR14LQ5THK1 2151 aa11.64□□□□□ -0.55
SNHG4-201ENST00000448190 MAP1AP78559 2803 aaPredicted RBP11.64□□□□□ -0.55
SNHG4-201ENST00000448190 A0A1W2PPL8 197 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 CENPBD1B2RD01 187 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 E7EQL1 145 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 ATP6V1G2-DDX39BF2Z307 99 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 HS3ST1O14792 307 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 SLC16A7O60669 478 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 ATE1O95260 518 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 MPZL1O95297 269 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 CECR9P0C854 216 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 CD53P19397 219 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 SDHAP31040 664 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 CENPAP49450 140 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 CDH11P55287 796 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 RAB39AQ14964 217 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 KPNB1Q14974 876 aaKnown RBP11.63□□□□□ -0.55
SNHG4-201ENST00000448190 ZNF672Q499Z4 452 aaPredicted RBP11.63□□□□□ -0.55
SNHG4-201ENST00000448190 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 ZNF627Q7L945 461 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 OR8D4Q8NGM9 314 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 TSSK2Q96PF2 358 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 NMNAT3Q96T66 252 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 TSSK6Q9BXA6 273 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 SRA1Q9HD15 236 aaKnown RBP11.63□□□□□ -0.55
SNHG4-201ENST00000448190 OBP2BQ9NPH6 170 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 MGAT4BQ9UQ53 548 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 AP4S1Q9Y587 144 aa11.63□□□□□ -0.55
SNHG4-201ENST00000448190 ABCA4P78363 2273 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 OTOGQ6ZRI0 2925 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 FAM171A2A8MVW0 826 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 FARS2O95363 451 aaKnown RBP11.62□□□□□ -0.55
SNHG4-201ENST00000448190 GPANK1O95872 356 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 RAF1P04049 648 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 HIST1H1CP16403 213 aaKnown RBP11.62□□□□□ -0.55
SNHG4-201ENST00000448190 CTLA4P16410 223 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 POU1F1P28069 291 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 LAP3P28838 519 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 NOS3P29474 1203 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 CALCRP30988 508 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 ZNF133P52736 654 aaPredicted RBP11.62□□□□□ -0.55
SNHG4-201ENST00000448190 GSG1Q2KHT4 349 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 C10orf128Q5T292 105 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 FAM205BPQ63HN1 556 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 GPR139Q6DWJ6 353 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 LEG1Q6P5S2 330 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 UGT2A3Q6UWM9 527 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 PAMR1Q6UXH9 720 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 B3GLCTQ6Y288 498 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 RASSF6Q6ZTQ3 369 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 SSX8Q7RTT4 187 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 SLC16A14Q7RTX9 510 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.62□□□□□ -0.55
SNHG4-201ENST00000448190 CCDC36Q8IYA8 594 aa11.62□□□□□ -0.55
SNHG4-201ENST00000448190 DEPDC4Q8N2C3 294 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms