RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 LILRA3Q8N6C8 439 aaPredicted RBP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 ZNF511Q8NB15 262 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 UBAC2Q8NBM4 344 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 OR2T27Q8NH04 317 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 ZBTB8AQ96BR9 441 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 FOXRED1Q96CU9 486 aaPredicted RBP17.47■□□□□ 0.39
HMGA1-205ENST00000447654 HRH4Q9H3N8 390 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 PARP11Q9NR21 331 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 POT1Q9NUX5 634 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 KLHL28Q9NXS3 571 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 FLVCR1Q9Y5Y0 555 aa17.47■□□□□ 0.39
HMGA1-205ENST00000447654 hCG_1809904A0A1W2PP81 198 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 A0A1W2PR64 198 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 A0A1W2PRV1 198 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 CXorf65A6NEN9 183 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 CPSF4LA6NMK7 179 aaKnown RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 EIF1AYO14602 144 aaKnown RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 P2RX6O15547 441 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 RCBTB2O95199 551 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 CHRM4P08173 479 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 RABIFP47224 123 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 EIF1AXP47813 144 aaKnown RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 OR2B8PP59922 312 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 STXBP1P61764 594 aaKnown RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 PPA1Q15181 289 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 PRAMEF17Q5VTA0 474 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 ANKRD16Q6P6B7 361 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 BTNL8Q6UX41 500 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 ZNF433Q8N7K0 673 aaPredicted RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 TMEM229BQ8NBD8 167 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 OR5T3Q8NGG3 340 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 OR1J1Q8NGS3 322 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 NOL4LQ96MY1 436 aaPredicted RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 HCAR1Q9BXC0 346 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 NOP16Q9Y3C1 178 aaKnown RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 DYRK1BQ9Y463 629 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 OTOL1A6NHN0 477 aaPredicted RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 OR2AG2A6NM03 316 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 HCKP08631 526 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 CRABP1P29762 137 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 RPS15P62841 145 aaKnown RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 HSPB3Q12988 150 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 RSU1Q15404 277 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 HIST2H3PS2Q5TEC6 136 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 C11orf96Q7Z7L8 435 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 SFTPA1Q8IWL2 248 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 C12orf76Q8N812 135 aaPredicted RBP17.46■□□□□ 0.39
HMGA1-205ENST00000447654 RSC1A1Q92681 617 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 FAM83CQ9BQN1 747 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 ZNF281Q9Y2X9 895 aa17.46■□□□□ 0.39
HMGA1-205ENST00000447654 RIIAD1A6NNX1 92 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 SAP18O00422 153 aaKnown RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 OR10H2O60403 315 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 YIF1AO95070 293 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 MRPL3P09001 348 aaKnown RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 CISD3P0C7P0 127 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 PGAM2P15259 253 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 EDNRAP25101 427 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 VIPR2P41587 438 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 ADPRHP54922 357 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 LTBQ06643 244 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 ATXN7L3Q14CW9 347 aaPredicted RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 ZNF750Q32MQ0 723 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 RNASE10Q5GAN6 216 aaKnown RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 TMEM205Q6UW68 189 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 C19orf47Q8N9M1 422 aaKnown RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 ZDHHC4Q9NPG8 344 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 CALML5Q9NZT1 146 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 TRPC4Q9UBN4 977 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 ADAM18Q9Y3Q7 739 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 PLXNA2O75051 1894 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 S1PR1P21453 382 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 CFPP27918 469 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 PSMB6P28072 239 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 PPICP45877 212 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 POLR2LP62875 67 aaKnown RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 CYCSP99999 105 aaKnown RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 LRRC37A5PQ49AS3 106 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 PAPD4Q6PIY7 484 aaKnown RBP17.45■□□□□ 0.38
HMGA1-205ENST00000447654 GABRG1Q8N1C3 465 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 SLC41A3Q96GZ6 507 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 CD180Q99467 661 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 RGCCQ9H4X1 137 aa17.45■□□□□ 0.38
HMGA1-205ENST00000447654 MARCH11A6NNE9 402 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 STMND1H3BQB6 276 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 PSMD9O00233 223 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 CDC42EP2O14613 210 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 IL2RAP01589 272 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 ADRB3P13945 408 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 PRSS3P35030 304 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 LSM6P62312 80 aaKnown RBP17.44■□□□□ 0.38
HMGA1-205ENST00000447654 TP53I3Q53FA7 332 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 IER5LQ5T953 404 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 FAHD2BQ6P2I3 314 aaPredicted RBP17.44■□□□□ 0.38
HMGA1-205ENST00000447654 TMEM64Q6YI46 380 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 GDF7Q7Z4P5 450 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 CCDC116Q8IYX3 515 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 MMP21Q8N119 569 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 OR4E2Q8NGC2 313 aa17.44■□□□□ 0.38
HMGA1-205ENST00000447654 NUBPLQ8TB37 319 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms