RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 UBE2MP61081 183 aaKnown RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 SLC3A1Q07837 685 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 HSPB3Q12988 150 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 EIF3IQ13347 325 aaKnown RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 TRA2AQ13595 282 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 CBFBQ13951 182 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 KIR2DS3Q14952 304 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 PON3Q15166 354 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 TMEM255AQ5JRV8 349 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 DNLZQ5SXM8 178 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 OR5M10Q6IEU7 315 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 ANKRD16Q6P6B7 361 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 HAGHLQ6PII5 290 aaPredicted RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 FAM111BQ6SJ93 734 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 NUP54Q7Z3B4 507 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 DMRTC2Q8IXT2 367 aaPredicted RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 COMMD1Q8N668 190 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 TMEM229BQ8NBD8 167 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 OR8K3Q8NH51 312 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 ADAMTS15Q8TE58 950 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 TMEM239Q8WW34 195 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 LCN9Q8WX39 176 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 PTX4Q96A99 478 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 C4orf36Q96KX1 117 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 CXorf58Q96LI9 332 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 OR7D2Q96RA2 312 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 FERD3LQ96RJ6 166 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 CNN2Q99439 309 aaKnown RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 TSNAXQ99598 290 aaKnown RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 STRADBQ9C0K7 418 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 RAB33BQ9H082 229 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 ENKD1Q9H0I2 346 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 OR52A5Q9H2C5 316 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 SAV1Q9H4B6 383 aaPredicted RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 CDCP1Q9H5V8 836 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 FANCFQ9NPI8 374 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 KLHL1Q9NR64 748 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 SLC22A11Q9NSA0 550 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 FAM86C1Q9NVL1 165 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 NKIRAS2Q9NYR9 191 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 CNIH4Q9P003 139 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 ZNF629Q9UEG4 869 aaPredicted RBP6.91□□□□□ -1.3
TRIM4-204ENST00000447480 GPR160Q9UJ42 338 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 ZNF780BQ9Y6R6 833 aa6.91□□□□□ -1.3
TRIM4-204ENST00000447480 PTPRZ1P23471 2315 aaPredicted RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 EP300Q09472 2414 aaPredicted RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 A0A1B0GTI1 187 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 GXYLT2A0PJZ3 443 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 MEGF11A6BM72 1044 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 LRIT2A6NDA9 550 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 PRR19A6NJB7 356 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 C4orf47A7E2U8 309 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 C2orf74A8MZ97 194 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 PATE3B3GLJ2 98 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 F8VVB4 439 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 F8VWA3 439 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 ZNF254O75437 659 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SCGNO76038 276 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 TOXO94900 526 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 HRGP04196 525 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 ZGLP1P0C6A0 271 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 CD79AP11912 226 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 TBPP20226 339 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SLC25A1P53007 311 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 OR10A3P58181 314 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 TAS2R19P59542 299 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 RPS11P62280 158 aaKnown RBP eCLIP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 RPS26P62854 115 aaKnown RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SKP1P63208 163 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 DEFA5Q01523 94 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SQSTM1Q13501 440 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SNTB1Q13884 538 aaKnown RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 MEF2DQ14814 521 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 RPE65Q16518 533 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 DEFB133Q30KQ1 61 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 LINC00303Q3SY05 128 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 AMZ1Q400G9 498 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 CLEC12AQ5QGZ9 265 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SLC48A1Q6P1K1 146 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 WDR74Q6RFH5 385 aaPredicted RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 ALKAL2Q6UX46 152 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 C17orf82Q86X59 251 aaPredicted RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 KMT5CQ86Y97 462 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 DND1Q8IYX4 353 aaKnown RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 OR2L13Q8N349 312 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 ARL14Q8N4G2 192 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 ZNF561Q8N587 486 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 TMEM99Q8N816 258 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 C15orf54Q8N8G6 183 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 NUP43Q8NFH3 380 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 BPIFCQ8NFQ6 507 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 LGALS14Q8TCE9 139 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SNX33Q8WV41 574 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 RNF141Q8WVD5 230 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 TNFAIP8L1Q8WVP5 186 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 CDS1Q92903 461 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 TCEAL3Q969E4 200 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 ARL11Q969Q4 196 aa6.9□□□□□ -1.3
TRIM4-204ENST00000447480 EXOSC8Q96B26 276 aaKnown RBP6.9□□□□□ -1.3
TRIM4-204ENST00000447480 SLC25A38Q96DW6 304 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms