RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 CMTM6Q9NX76 183 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 GMPR2Q9P2T1 348 aaKnown RBP13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 UGT2A1Q9Y4X1 527 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CAPN7Q9Y6W3 813 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 PHF1O43189 567 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FARS2O95363 451 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SNAP29O95721 258 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 VIMP08670 466 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MMP7P09237 267 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ACADSP16219 412 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ALDH3B1P43353 468 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 DAP3P51398 398 aaKnown RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SEC24CP53992 1094 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CLRN1P58418 232 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SELENOWP63302 87 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 GUCY1A3Q02108 690 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MAD2L1BPQ15013 274 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 TRIP10Q15642 601 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LRRC23Q53EV4 343 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FAM120AOSQ5T036 256 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 GKAP1Q5VSY0 366 aaPredicted RBP13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MICU2Q8IYU8 434 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SLC30A7Q8NEW0 376 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 RCN3Q96D15 328 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 PRRC1Q96M27 445 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CHODLQ9H9P2 273 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MAN2C1Q9NTJ4 1040 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ARMCX1Q9P291 453 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FZR1Q9UM11 496 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HIF3AQ9Y2N7 669 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MED31Q9Y3C7 131 aa13.6□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IGLV3-9A0A075B6K5 115 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IGKV1D-43A0A0B4J1Z2 117 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ELOVL7A1L3X0 281 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 RNF212BA8MTL3 300 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MCIDASD6RGH6 385 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 PIP5K1CO60331 668 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HPXP02790 462 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CCL2P13500 99 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ZNF250P15622 560 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CHN2P52757 468 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MRPS34P82930 218 aaKnown RBP13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FHL1Q13642 323 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LAPTM4AQ15012 233 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SLC36A2Q495M3 483 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IL17RELQ6ZVW7 336 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SLC16A14Q7RTX9 510 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HDDC2Q7Z4H3 204 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SLC15A3Q8IY34 581 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 POU5F2Q8N7G0 328 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HDAC2Q92769 488 aaKnown RBP13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 NABP1Q96AH0 204 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SNX18Q96RF0 628 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 C1orf198Q9H425 327 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SMURF2Q9HAU4 748 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SNX13Q9Y5W8 968 aa13.59□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SLC22A23A1A5C7 686 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 HTR3EA5X5Y0 456 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 FFAR1O14842 300 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 MGRN1O60291 552 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 NCR1O76036 304 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 SLC2A10O95528 541 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 TGFAP01135 160 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 TCN1P20061 433 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 LSP1P33241 339 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 ZNF84P51523 738 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 ST3GAL3Q11203 375 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 C8orf82Q6P1X6 216 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 TMEM53Q6P2H8 277 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 VTCN1Q7Z7D3 282 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 OFCC1Q8IZS5 231 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 LRRC75AQ8NAA5 344 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 CPEB3Q8NE35 698 aaKnown RBP13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 RP9Q8TA86 221 aaKnown RBP13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 TMEM158Q8WZ71 300 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 BPIFA2Q96DR5 249 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 TPD52L3Q96J77 140 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 RACGAP1Q9H0H5 632 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 TXNIPQ9H3M7 391 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 SIAEQ9HAT2 523 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 STX18Q9P2W9 335 aaKnown RBP13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 DUSP13Q9UII6 198 aa13.58□□□□□ -0.24
SPTLC1P1-201ENST00000447199 RP2O75695 350 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 PRSS23O95084 383 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 CLPTM1O96005 669 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 IGHMP01871 453 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 FAM157BP0CG42 384 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 NAT2P11245 290 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 SRD5A1P18405 259 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 MAKP20794 623 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 COL8A2P25067 703 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 APEX1P27695 318 aaKnown RBP13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 CDAP32320 146 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 CDH15P55291 814 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 UCP2P55851 309 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 ERVS71-1P61550 626 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 MRPS11P82912 194 aaKnown RBP13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 FMODQ06828 376 aa13.57□□□□□ -0.24
SPTLC1P1-201ENST00000447199 TAF11Q15544 211 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms