RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 RENP00797 406 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 PIGRP01833 764 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 KLK3P07288 261 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 STSP08842 583 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 NR2C1P13056 603 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CAPN2P17655 700 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 VDAC1P21796 283 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 SPAM1P38567 509 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 TNFSF9P41273 254 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 KIR2DS2P43631 304 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 SSR4P51571 173 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 UBE2MP61081 183 aaKnown RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 PAX2Q02962 417 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 NHLRC3Q5JS37 347 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR5M10Q6IEU7 315 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ANKRD26P1Q6NSI1 321 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 MBOAT1Q6ZNC8 495 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 SLC26A11Q86WA9 606 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 MYOCDQ8IZQ8 938 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ARHGAP18Q8N392 663 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZNF564Q8TBZ8 553 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 SUN5Q8TC36 379 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 VN1R17PQ8TDU5 208 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CACNG8Q8WXS5 425 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ANKRD9Q96BM1 317 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 PGLYRP4Q96LB8 373 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 RNF126Q9BV68 326 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZYG11BQ9C0D3 744 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 RAB1BQ9H0U4 201 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 PIGUQ9H490 435 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CWH43Q9H720 699 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 HEXA-AS1Q9H8Q6 139 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 LY9Q9HBG7 655 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 BEX1Q9HBH7 125 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 IL26Q9NPH9 171 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 HRASLS2Q9NWW9 162 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 CCDC59Q9P031 241 aaKnown RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ADAM22Q9P0K1 906 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ARMCX1Q9P291 453 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 ABCD2Q9UBJ2 740 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 DDX19BQ9UMR2 479 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 RBMX2Q9Y388 322 aaKnown RBP3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 REREQ9P2R6 1566 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 UBN2Q6ZU65 1347 aa3.42□□□□□ -1.86
HMGB1P48-201ENST00000446155 DNMT1P26358 1616 aaKnown RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 TNRQ92752 1358 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CDK13Q14004 1512 aaKnown RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 KDM5DQ9BY66 1539 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 IGHV1OR21-1A0A087WYE8 117 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 IGKV3D-20A0A0C4DH25 116 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 DHRS7CA6NNS2 312 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 SHISA9B4DS77 424 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 ETHE1O95571 254 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 SERPINA5P05154 406 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 KRT16P08779 473 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 FOLR2P14207 255 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CTRB1P17538 263 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 TBPP20226 339 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 MAP3K7CLP57077 242 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 PSMC5P62195 406 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 RPS15AP62244 130 aaKnown RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 ADARB1P78563 741 aaKnown RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 TRDNQ13061 729 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 SERTAD2Q14140 314 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 ANGPT1Q15389 498 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 USF2Q15853 346 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 KLF17Q5JT82 389 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 MARCH8Q5T0T0 291 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 LEMD1Q68G75 181 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CTRB2Q6GPI1 263 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 Q6ZN92 141 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 COPS6Q7L5N1 327 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 SNX20Q7Z614 316 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CMC1Q7Z7K0 106 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 LHFPL3Q86UP9 236 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 RBM45Q8IUH3 476 aaKnown RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 SKA3Q8IX90 412 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 TRAM1L1Q8N609 369 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 POM121L12Q8N7R1 296 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CSNK1G2-AS1Q8NCQ2 148 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR6T1Q8NGN1 323 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 OR5K2Q8NHB8 316 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CLHC1Q8NHS4 586 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 ZNF502Q8TBZ5 544 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CXorf40AQ8TE69 158 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 SMARCD2Q92925 531 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 FAM131CQ96AQ9 280 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 APH1AQ96BI3 265 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 ECHDC3Q96DC8 303 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 GLT1D1Q96MS3 346 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 TSSK3Q96PN8 268 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 MCCC1Q96RQ3 725 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 KCTD14Q9BQ13 255 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 HINT2Q9BX68 163 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 GBA3Q9H227 469 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 RNF167Q9H6Y7 350 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 CSNK1G1Q9HCP0 422 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 MIEF1Q9NQG6 463 aa3.41□□□□□ -1.86
HMGB1P48-201ENST00000446155 ADA2Q9NZK5 511 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms