RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SLC39A5Q6ZMH5 540 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 RAB42Q8N4Z0 105 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 EDARADDQ8WWZ3 215 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 FAM3DQ96BQ1 224 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 DNAJA3Q96EY1 480 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 SLC6A7Q99884 636 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 OR2S2Q9NQN1 319 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 ATG2BQ96BY7 2078 aa12.67□□□□□ -0.38
VPS52-212ENST00000445902 BLOC1S5-TXNDC5H3BN57 136 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 ZNF208O43345 1280 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 SLC25A4P12235 298 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 MUC1P15941 1255 aaPredicted RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 PTAFRP25105 342 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 CCKBRP32239 447 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 TAS2R19P59542 299 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 AIMP2Q13155 320 aaKnown RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 PPP1R1AQ13522 171 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 ELAVL1Q15717 326 aaKnown RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 EIF2S3LQ2VIR3 472 aaKnown RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 OR10K2Q6IF99 312 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 LRRC69Q6ZNQ3 347 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 TMEM200AQ86VY9 491 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 OR2L3Q8NG85 312 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 OR4E2Q8NGC2 313 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 DCUN1D4Q92564 292 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 SEH1LQ96EE3 360 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 FOXN4Q96NZ1 517 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 SEMA6CQ9H3T2 930 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 VSIG4Q9Y279 399 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 NOTCH4Q99466 2003 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 APEHP13798 732 aaKnown RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 CDKN2AP42771 156 aaKnown RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 FABP9Q0Z7S8 132 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 C10orf91Q5T1B1 145 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 PGAP1Q75T13 922 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 OR52E1Q8NGJ3 308 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 NKD1Q969G9 470 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 PPP1R14AQ96A00 147 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 CLCC1Q96S66 551 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 NAA11Q9BSU3 229 aaPredicted RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 RSRP1Q9BUV0 290 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 ALX4Q9H161 411 aaPredicted RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 ACKR4Q9NPB9 350 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 PRMT8Q9NR22 394 aaPredicted RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 MSRAQ9UJ68 235 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 CDH23Q9H251 3354 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 CXorf51AA0A1B0GTR3 108 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 FITM1A5D6W6 292 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 C5orf51A6NDU8 294 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 DCTN6O00399 190 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 FGF16O43320 207 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 DOK2O60496 412 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 SRPX2O60687 465 aaPredicted RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 C8AP07357 584 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 F2RL1P55085 397 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 CDK3Q00526 305 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 ECH1Q13011 328 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 FAM53BQ14153 422 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 IRF4Q15306 451 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 VWA2Q5GFL6 755 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 TCEAL5Q5H9L2 206 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 ZNF684Q5T5D7 378 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 SFTPA1Q8IWL2 248 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 OR13C8Q8NGS7 320 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 STOML3Q8TAV4 291 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 RPS4Y2Q8TD47 263 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 GPX8Q8TED1 209 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 PIK3IP1Q96FE7 263 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 CST11Q9H112 138 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 NOSIPQ9Y314 301 aaKnown RBP12.66□□□□□ -0.38
VPS52-212ENST00000445902 CSAG2Q9Y5P2 127 aa12.66□□□□□ -0.38
VPS52-212ENST00000445902 A0A1B0GTQ1 180 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 CYB5AP00167 134 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 TACSTD2P09758 323 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 CPMP14384 443 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 ABCD3P28288 659 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 PEBP1P30086 187 aaKnown RBP12.65□□□□□ -0.38
VPS52-212ENST00000445902 ACTBP60709 375 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 ACTG1P63261 375 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 C12orf40Q86WS4 652 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 OR6N2Q8NGY6 317 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 ROBO4Q8WZ75 1007 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 NRIP2Q9BQI9 281 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 SEC11CQ9BY50 192 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 LAT2Q9GZY6 243 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 SLC22A7Q9Y694 548 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 FANCMQ8IYD8 2048 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 KIF26BQ2KJY2 2108 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 ZNF736B4DX44 427 aaPredicted RBP12.65□□□□□ -0.38
VPS52-212ENST00000445902 CDC40O60508 579 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS52-212ENST00000445902 GLCEO94923 617 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 ZNF44P15621 663 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 AKR1C4P17516 323 aa12.65□□□□□ -0.38
VPS52-212ENST00000445902 EIF2B1Q14232 305 aaKnown RBP12.65□□□□□ -0.38
VPS52-212ENST00000445902 RAB11BQ15907 218 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms