RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 HAVCR1Q96D42 359 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 FAM122AQ96E09 287 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 NUS1Q96E22 293 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 VPS39Q96JC1 886 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 VPS35Q96QK1 796 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 GPR22Q99680 433 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 MAPKAP1Q9BPZ7 522 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 KIFC1Q9BW19 673 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 FBXO44Q9H4M3 255 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 NMRAL1Q9HBL8 299 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 CSNK1G1Q9HCP0 422 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 STX18Q9P2W9 335 aaKnown RBP3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 SAMD4AQ9UPU9 718 aaKnown RBP3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 ZNF256Q9Y2P7 627 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 FLVCR1Q9Y5Y0 555 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 MYO16Q9Y6X6 1858 aa3.18□□□□□ -1.9
HMGB3P6-201ENST00000444896 COL4A4P53420 1690 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 LRRK1Q38SD2 2015 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 DOCK3Q8IZD9 2030 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 PTPRDP23468 1912 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 HEATR9A2RTY3 570 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 NVLO15381 856 aaKnown RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CACNG3O60359 315 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 LYPLA1O75608 230 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 TM7SF2O76062 418 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 DIRAS3O95661 229 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 PGK1P00558 417 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 IGLV3-25P01717 112 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 OPN1LWP04000 364 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 C2P06681 752 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 RPSAP08865 295 aaKnown RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CCDC166P0CW27 439 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 HOXB8P17481 243 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 NCF2P19878 526 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ATP6V1C1P21283 382 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 GCKP35557 465 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 RGRP47804 291 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 P2RY4P51582 365 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 RAB10P61026 200 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ST3GAL3Q11203 375 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 SCGB2A2Q13296 93 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 FAM83EQ2M2I3 478 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ACSBG2Q5FVE4 666 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CES3Q6UWW8 571 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ZYG11AQ6WRX3 759 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 LRRC74BQ6ZQY2 392 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ANKRD37Q7Z713 158 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 LINC01561Q8N1V8 128 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 BBS5Q8N3I7 341 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 GPATCH11Q8N954 259 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 OR10T2Q8NGX3 314 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CNIH3Q8TBE1 160 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 PDCD6IPQ8WUM4 868 aaKnown RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CCDC126Q96EE4 140 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CELF6Q96J87 481 aaKnown RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 SERPINI1Q99574 410 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 THTPAQ9BU02 230 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ZYG11BQ9C0D3 744 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ILKAPQ9H0C8 392 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 VCXQ9H320 206 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CAB39LQ9H9S4 337 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 EML4Q9HC35 981 aaKnown RBP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 RBM22Q9NW64 420 aaKnown RBP eCLIP3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 TAS2R1Q9NYW7 299 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 TMEM216Q9P0N5 145 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CELA1Q9UNI1 258 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 SCML2Q9UQR0 700 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 PDE10AQ9Y233 779 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 SHROOM3Q8TF72 1996 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 CASP8AP2Q9UKL3 1982 aa3.17□□□□□ -1.9
HMGB3P6-201ENST00000444896 ZNF638Q14966 1978 aaKnown RBP3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 SRCAPQ6ZRS2 3230 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 PLXNA3P51805 1871 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 A0A087WZY1 265 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 TRPC5OSA6NMA1 111 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 E9PBE3 544 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 WWP2O00308 870 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 PFDN6O15212 129 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 HDAC3O15379 428 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 KLHL41O60662 606 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 SMIM24O75264 130 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 ENTPD5O75356 428 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 STAMBPO95630 424 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 IGF1P05019 195 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 FGF1P05230 155 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 HLA-DQB2P05538 268 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 ASGR1P07306 291 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 HBQ1P09105 142 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 RBP1P09455 135 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 THRAP10827 490 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 COX4I1P13073 169 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 HOXD10P28358 340 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 SLC1A2P43004 574 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 BDKRB1P46663 353 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 OR1G1P47890 313 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 RPL14P50914 215 aaKnown RBP3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 ACTR3P61158 418 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 NTHL1P78549 312 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 XIAPP98170 497 aa3.16□□□□□ -1.9
HMGB3P6-201ENST00000444896 SMARCB1Q12824 385 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms