RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 GLYATL3Q5SZD4 288 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 GDPD4Q6W3E5 623 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 FJX1Q86VR8 437 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ASB17Q8WXJ9 295 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 THRSPQ92748 146 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 PARP12Q9H0J9 701 aaKnown RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 B3GALT2O43825 422 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 NDUFB2O95178 105 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 F2RL1P55085 397 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 HIST2H3PS2Q5TEC6 136 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 LILRA3Q8N6C8 439 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 TFGQ92734 400 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 OR7D2Q96RA2 312 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 NRIP2Q9BQI9 281 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 WDR13Q9H1Z4 485 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 PPP1R14DQ9NXH3 145 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 GREB1LQ9C091 1923 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 MCM3APO60318 1980 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CLEC3AO75596 197 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ADH1CP00326 375 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 C5AR1P21730 350 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CCKBRP32239 447 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ACTR1BP42025 376 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 PNLIPRP2P54317 469 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CASP6P55212 293 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 SPCS3P61009 180 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 CRMP1Q14194 572 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 TMEM229BQ8NBD8 167 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 PELI1Q96FA3 418 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 BARX1Q9HBU1 254 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 FAM230AA0A1W2PPH8 454 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 STK17BO94768 372 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ASGR1P07306 291 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 RCC1P18754 421 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 CDX1P47902 265 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 EBPQ15125 230 aaKnown RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 MOGAT2Q3SYC2 334 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 C10orf91Q5T1B1 145 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 TXNDC8Q6A555 127 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 FAHD2BQ6P2I3 314 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 SLC25A42Q86VD7 318 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 NRSN1Q8IZ57 195 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 KDM8Q8N371 416 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 FIBINQ8TAL6 211 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 FAHD2AQ96GK7 314 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 SLC41A2Q96JW4 573 aa4.59□□□□□ -1.67
HERC1-201ENST00000443617 ZNF107Q9UII5 783 aaPredicted RBP4.59□□□□□ -1.67
HERC1-201ENST00000443617 BHLHE40O14503 412 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 OR8G3PP0DMU2 310 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 PRLHRP49683 370 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 AVL9Q8NBF6 648 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 OR9K2Q8NGE7 335 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 DOK4Q8TEW6 326 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 CA5BP1Q8WTZ4 195 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 ZNF337Q9Y3M9 751 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 MMP24Q9Y5R2 645 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 TBC1D3KA0A087X1G2 549 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 TBC1D3BA6NDS4 549 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 TBC1D3FA6NER0 549 aaPredicted RBP4.59□□□□□ -1.68
HERC1-201ENST00000443617 IGHV2-70P01814 119 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 OR3A2P47893 321 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 AFF3P51826 1226 aaKnown RBP4.59□□□□□ -1.68
HERC1-201ENST00000443617 PDZD11Q5EBL8 140 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 TBC1D3GQ6DHY5 549 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 Q6ZVU0 165 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 PGLYRP3Q96LB9 341 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 FKRPQ9H9S5 495 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 DCTN6O00399 190 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 RBMXP38159 391 aaKnown RBP4.59□□□□□ -1.68
HERC1-201ENST00000443617 SLC9A3R2Q15599 337 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 ZNF511Q8NB15 262 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 TIMP4Q99727 224 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 ELOVL3Q9HB03 270 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 HAO2Q9NYQ3 351 aa4.59□□□□□ -1.68
HERC1-201ENST00000443617 CXorf65A6NEN9 183 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 PLPP1O14494 284 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 PHOX2AO14813 284 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 C6P13671 934 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ALDH3B1P43353 468 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 LPAR6P43657 344 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 GUCA2AQ02747 115 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF85Q03923 595 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CDKN3Q16667 212 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 C21orf62-AS1Q17RA5 79 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ACTBL2Q562R1 376 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 LIPNQ5VXI9 398 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TMEM64Q6YI46 380 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CHST14Q8NCH0 376 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CCDC74AQ96AQ1 378 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SLC35A4Q96G79 324 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TMEM235A6NFC5 223 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 HIST1H1CP16403 213 aaKnown RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 GNALP38405 381 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 THSD4Q6ZMP0 1018 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SP7Q8TDD2 431 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 SELENOIQ9C0D9 397 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SLC5A10A0PJK1 596 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 KLF4O43474 513 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CD8AP01732 235 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 DBIP07108 87 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms