RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CD300LDQ6UXZ3 194 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 THSD4Q6ZMP0 1018 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 YTHDF3Q7Z739 585 aaKnown RBP9.46□□□□□ -0.9
HDAC6-211ENST00000443563 CLDN22Q8N7P3 220 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 NRBF2Q96F24 287 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 DUS3LQ96G46 650 aaKnown RBP9.46□□□□□ -0.9
HDAC6-211ENST00000443563 SAMD8Q96LT4 415 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 Q96M85 177 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 ERMAPQ96PL5 475 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-211ENST00000443563 SLC38A2Q96QD8 506 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 IFT27Q9BW83 186 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 C1QTNF6Q9BXI9 259 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 UBTD1Q9HAC8 227 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF556Q9HAH1 456 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 TMEM38BQ9NVV0 291 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 VNN3Q9NY84 501 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 IL20Q9NYY1 176 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 CRNNQ9UBG3 495 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-211ENST00000443563 POU2F3Q9UKI9 436 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 AP4S1Q9Y587 144 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 IER3IP1Q9Y5U9 82 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 CDH10Q9Y6N8 788 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 CSMD1Q96PZ7 3565 aa9.46□□□□□ -0.9
HDAC6-211ENST00000443563 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-211ENST00000443563 OTOGQ6ZRI0 2925 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 RAI1Q7Z5J4 1906 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SLC22A23A1A5C7 686 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 PRSS37A4D1T9 235 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 TMCC2O75069 709 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SLC2A10O95528 541 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 PPP1R3DO95685 299 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 RAB36O95755 333 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 RENP00797 406 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 PTHP01270 115 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 IGKV3-15P01624 115 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 CRYAAP02489 173 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 ANXA8P13928 327 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF26P17031 533 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 FASP25445 335 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 FXYD6P3P58550 94 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 MRPS34P82930 218 aaKnown RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 CCNIQ14094 377 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 GSG1Q2KHT4 349 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SLC36A2Q495M3 483 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF672Q499Z4 452 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 MESTQ5EB52 335 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 TMEM53Q6P2H8 277 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SLC22A25Q6T423 547 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SLC16A14Q7RTX9 510 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 JAZF1Q86VZ6 243 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 ZNF611Q8N823 705 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 DNAJC9Q8WXX5 260 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 AKAP1Q92667 903 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 PIGTQ969N2 578 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 FBXW5Q969U6 566 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 GTPBP3Q969Y2 492 aaKnown RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SLCO4A1Q96BD0 722 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 NMD3Q96D46 503 aaKnown RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SNX18Q96RF0 628 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 FEVQ99581 238 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 WACQ9BTA9 647 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 BDH2Q9BUT1 245 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 SIAEQ9HAT2 523 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 TBC1D23Q9NUY8 699 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 FAIMQ9NVQ4 179 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 B3GNT2Q9NY97 397 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 VSX1Q9NZR4 365 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 PDP1Q9P0J1 537 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-211ENST00000443563 IL20RAQ9UHF4 553 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 BAIAP2Q9UQB8 552 aa9.45□□□□□ -0.9
HDAC6-211ENST00000443563 IGHV1-18A0A0C4DH31 117 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 A0A1W2PPR1 153 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 SOCS2O14508 198 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 TIPRLO75663 272 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 PLAUP00749 431 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 IGLV1-44P01699 117 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 CRABP1P29762 137 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 ERFP50548 548 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 CDH11P55287 796 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 PCBD1P61457 104 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 RAB1AP62820 205 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 TUBA1BP68363 451 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 TUBA4AP68366 448 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 FMODQ06828 376 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 ATP6AP1Q15904 470 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 ZFP1Q6P2D0 407 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 SHQ1Q6PI26 577 aaKnown RBP9.44□□□□□ -0.9
HDAC6-211ENST00000443563 TUBA1AQ71U36 451 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 MDP1Q86V88 176 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 HIPK1Q86Z02 1210 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 SKA3Q8IX90 412 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 KBTBD8Q8NFY9 601 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 OR2T33Q8NG76 320 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 NSMAFQ92636 917 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 UTP4Q969X6 686 aaKnown RBP9.44□□□□□ -0.9
HDAC6-211ENST00000443563 RASD2Q96D21 266 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 C1orf198Q9H425 327 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 EGLN3Q9H6Z9 239 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 RNF121Q9H920 327 aa9.44□□□□□ -0.9
HDAC6-211ENST00000443563 SEC61A2Q9H9S3 476 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms