RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SPNP16150 400 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 ELK1P19419 428 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 MAPK3P27361 379 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-202ENST00000439724 DPP4P27487 766 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 RPS27P42677 84 aaKnown RBP10.54□□□□□ -0.72
SMAD3-202ENST00000439724 DSCR4P56555 118 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-202ENST00000439724 CLDN6P56747 220 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 OR2B6P58173 313 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 RPS15P62841 145 aaKnown RBP10.54□□□□□ -0.72
SMAD3-202ENST00000439724 ADAM8P78325 824 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 FOXK1P85037 733 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 RASGEF1BQ0VAM2 473 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 C19orf57Q0VDD7 668 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 Q0VFX4 171 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 ASAH1Q13510 395 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 SLC17A1Q14916 467 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 PCK2Q16822 640 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 SLC25A35Q3KQZ1 300 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 Q499Y3 187 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 PYDC2Q56P42 97 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 TEX30Q5JUR7 227 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 HDDC2Q7Z4H3 204 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 UEVLDQ8IX04 471 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 ZNF679Q8IYX0 411 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 OR5M1Q8NGP8 315 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 NSMAFQ92636 917 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 MIB2Q96AX9 1013 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 TXNDC15Q96J42 360 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 C4orf45Q96LM5 186 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 OR5B2Q96R09 309 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 TMEM185BQ9H7F4 350 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 NOX4Q9NPH5 578 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 CYSLTR2Q9NS75 346 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 SACM1LQ9NTJ5 587 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 MED29Q9NX70 200 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 ABRACLQ9P1F3 81 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 COA3Q9Y2R0 106 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-202ENST00000439724 PCSK5Q92824 1860 aa10.54□□□□□ -0.72
SMAD3-202ENST00000439724 LOC102725191A0A1B0GVB3 256 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 A0A1W2PNR3 127 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 A0A1W2PPK0 400 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 ACOD1A6NK06 481 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 FAM25AB3EWG3 89 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 FAM25CB3EWG5 89 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 FAM25GB3EWG6 89 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 PDCD5O14737 125 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 TRAF3IP2O43734 574 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 ZNF254O75437 659 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 HRGP04196 525 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 SERPINA7P05543 415 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 ZNF17P17021 662 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 NPR2P20594 1047 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 TCEA1P23193 301 aaKnown RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 RBMS1P29558 406 aaKnown RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 CCR9P51686 369 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 BIDP55957 195 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 SLC35A1P78382 337 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 FMODQ06828 376 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 IL18Q14116 193 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 MEP1BQ16820 701 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 TMEM164Q5U3C3 297 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 TIGD3Q6B0B8 471 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 KCTD18Q6PI47 426 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 CCBE1Q6UXH8 406 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 LRRC69Q6ZNQ3 347 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 WDFY1Q8IWB7 410 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 CADM3Q8N126 398 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 OR1J4Q8NGS1 313 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 TRMT10AQ8TBZ6 339 aaKnown RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 RNF128Q8TEB7 428 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 THRSPQ92748 146 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 FOXN4Q96NZ1 517 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 OXGR1Q96P68 337 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 DCBLD2Q96PD2 775 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 NEURL2Q9BR09 285 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 MRPL13Q9BYD1 178 aaKnown RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 ELOVL3Q9HB03 270 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 B3GAT2Q9NPZ5 323 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 P4HTMQ9NXG6 502 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 FOXJ2Q9P0K8 574 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 KLHL9Q9P2J3 617 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 ING1Q9UK53 422 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 ALPK2Q86TB3 2170 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 AQP7P3A6NL99 342 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 C21orf140B9A014 251 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 MASP2O00187 686 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 TERTO14746 1132 aaKnown RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 AQP8O94778 261 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 PMS2P2O95744 297 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 RAF1P04049 648 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 EIF4EP06730 217 aaKnown RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 HNRNPCP07910 306 aaKnown RBP eCLIP10.53□□□□□ -0.729e-7■■□□□ 13.9
SMAD3-202ENST00000439724 SLC2A2P11168 524 aaPredicted RBP10.53□□□□□ -0.72
SMAD3-202ENST00000439724 ATF1P18846 271 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 SRMP19623 302 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 TALDO1P37837 337 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 KIR3DL2P43630 455 aa10.53□□□□□ -0.72
SMAD3-202ENST00000439724 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms