RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
NEK1-201ENST00000439128 CLDN24A6NM45 220 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 HOXC4P09017 264 aaPredicted RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 ARNTP27540 789 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 HLA-DMAP28067 261 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 GIPRP48546 466 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 RAB13P51153 203 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 GABARAPL2P60520 117 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 CLDN22Q8N7P3 220 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 ZFAND1Q8TCF1 268 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 MUL1Q969V5 352 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 LGALS12Q96DT0 336 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 MED29Q9NX70 200 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 NTNG1Q9Y2I2 539 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 CASP8AP2Q9UKL3 1982 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 IGHV5-10-1A0A0J9YXX1 117 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 CXorf51AA0A1B0GTR3 108 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 TEX51A0A1B0GUA7 166 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 CDC14BO60729 498 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 NID1P14543 1247 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 CNR1P21554 472 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 RRAS2P62070 204 aaPredicted RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 RPL23AP62750 156 aaKnown RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 RBMXL3Q8N7X1 1067 aaKnown RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 RNF128Q8TEB7 428 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 RPH3ALQ9UNE2 315 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 SLC22A23A1A5C7 686 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 TRABD2BA6NFA1 517 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 SELENOFO60613 162 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 LTBQ06643 244 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 ISXQ2M1V0 245 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 ADPRMQ3LIE5 342 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 FJX1Q86VR8 437 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 ST8SIA4Q92187 359 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 TMEM100Q9NV29 134 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 MYH7BA7E2Y1 1941 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 TUBAL3A6NHL2 446 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 HMX3A6NHT5 357 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 H7C1Q1 480 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 SIRPB1O00241 398 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 UBFD1O14562 309 aaKnown RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 TOX3O15405 576 aaPredicted RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 CD3EP07766 207 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 OR8U9P0C7N5 309 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 GABRA1P14867 456 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 SLC6A12P48065 614 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 THEM4Q5T1C6 240 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 SAXO2Q658L1 398 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 ALKBH3Q96Q83 286 aaPredicted RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 TP63Q9H3D4 680 aaPredicted RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 ACKR4Q9NPB9 350 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 ETAA1Q9NY74 926 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 FZR1Q9UM11 496 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 TMA7Q9Y2S6 64 aaKnown RBP11.03□□□□□ -0.64
NEK1-201ENST00000439128 POLDIP2Q9Y2S7 368 aa11.03□□□□□ -0.64
NEK1-201ENST00000439128 ANKUB1A6NFN9 424 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 ACOD1A6NK06 481 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 SOCS6O14544 535 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 LIPCP11150 499 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 GM2AP17900 193 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 BSGP35613 385 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 EMDP50402 254 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 MAP2K6P52564 334 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 PPP1CAP62136 330 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 DEFA5Q01523 94 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 AGAP6Q5VW22 663 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 CORO6Q6QEF8 472 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 TMEM108Q6UXF1 575 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 SHARPINQ9H0F6 387 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 NOX4Q9NPH5 578 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 GOSR2O14653 212 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 OR2T7P0C7T2 308 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 KIR2DL1P43626 348 aaPredicted RBP11.02□□□□□ -0.64
NEK1-201ENST00000439128 OR2T27Q8NH04 317 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 SGK3Q96BR1 496 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 UPRTQ96BW1 309 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 TXLNGYQ9BZA5 131 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 EBF1Q9UH73 591 aa11.02□□□□□ -0.64
NEK1-201ENST00000439128 LAMB1P07942 1786 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 A0A087WV62 115 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
NEK1-201ENST00000439128 CREBL2O60519 120 aaPredicted RBP11.02□□□□□ -0.65
NEK1-201ENST00000439128 CDK5R2Q13319 367 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 RNPS1Q15287 305 aaKnown RBP11.02□□□□□ -0.65
NEK1-201ENST00000439128 ACKR1Q16570 336 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 AKR1C8PQ5T2L2 129 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 ABI3BPQ7Z7G0 1075 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 GPR119Q8TDV5 335 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 ZFP64Q9NPA5 681 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 TRBV5-4A0A0C4DH59 114 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 SH2D1BO14796 132 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 RPA2P15927 270 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 TAS2R31P59538 309 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 ACVR1Q04771 509 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 ZNF169Q14929 603 aaPredicted RBP11.02□□□□□ -0.65
NEK1-201ENST00000439128 NKG7Q16617 165 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 WDR74Q6RFH5 385 aaPredicted RBP11.02□□□□□ -0.65
NEK1-201ENST00000439128 ABHD11Q8NFV4 315 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 RAB3CQ96E17 227 aa11.02□□□□□ -0.65
NEK1-201ENST00000439128 MRI1Q9BV20 369 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms