RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 SULT1C2O00338 296 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 TOR1AO14656 332 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 YKT6O15498 198 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 CLN5O75503 358 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 RPS2P15880 293 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 MAP2K6P52564 334 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 RPS27AP62979 156 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 UBA52P62987 128 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 ZNF385BQ569K4 471 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 DLEU7Q6UYE1 221 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 RBMXL3Q8N7X1 1067 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 NIPAL2Q9H841 368 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 P2RX1P51575 399 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 RAP2BP61225 183 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 PTRH1Q86Y79 214 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 STT3BQ8TCJ2 826 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 ST7LQ8TDW4 575 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 HIPK2Q9H2X6 1198 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 UBE2ZQ9H832 354 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 SULT1B1O43704 296 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 TEKQ02763 1124 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 ELAVL1Q15717 326 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 CLVS2Q5SYC1 327 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 OR13F1Q8NGS4 319 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 KCTD12Q96CX2 325 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 PHF7Q9BWX1 381 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 TINAGL1Q9GZM7 467 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 TCEAL2Q9H3H9 227 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 OR51B4Q9Y5P0 310 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 SHISA7A6NL88 538 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 IDSB3KWA1 339 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 SIX6O95475 246 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 RPL27P61353 136 aaKnown RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 YOD1Q5VVQ6 348 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 GJC3Q8NFK1 279 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 OR10K1Q8NGX5 313 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 STACQ99469 402 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 SLC19A3Q9BZV2 496 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 CASP3P42574 277 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 OTUD1Q5VV17 481 aaPredicted RBP15.76■□□□□ 0.11
PTPRF-209ENST00000438120 SDF2Q99470 211 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 SAMD10Q9BYL1 202 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 OR11A1Q9GZK7 315 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 RNF167Q9H6Y7 350 aa15.76■□□□□ 0.11
PTPRF-209ENST00000438120 MYH4Q9Y623 1939 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 FITM1A5D6W6 292 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 CPT2P23786 658 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 RFC3P40938 356 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 GPR78Q96P69 363 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 C11orf54Q9H0W9 315 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-209ENST00000438120 UFSP2Q9NUQ7 469 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 TNFRSF10CO14798 259 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 XKR7Q5GH72 579 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 SAXO2Q658L1 398 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 GAB3Q8WWW8 586 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 TSSK2Q96PF2 358 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 KLK4Q9Y5K2 254 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 ANKRD61A6NGH8 418 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 SLC16A6O15403 523 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 FABP7O15540 132 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 ANXA7P20073 488 aaKnown RBP15.75■□□□□ 0.11
PTPRF-209ENST00000438120 C9orf152Q5JTZ5 239 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 RPS10-NUDT3A0A1W2PQS6 291 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 RPS10P46783 165 aaKnown RBP15.75■□□□□ 0.11
PTPRF-209ENST00000438120 HIST2H3PS2Q5TEC6 136 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 KDM4DQ6B0I6 523 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 ANKRD33Q7Z3H0 272 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 CMIPQ8IY22 773 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 SMAP2Q8WU79 429 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-209ENST00000438120 LINC01599Q8WXQ3 324 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 FCRL1Q96LA6 429 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 LOC100289279A0A1B0GTE1 492 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 ZNF732B4DXR9 585 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 UBL3O95164 117 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 SSTP61278 116 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 DUSP2Q05923 314 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 ADGRF3Q8IZF5 1079 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 UBL7Q96S82 380 aaPredicted RBP15.75■□□□□ 0.11
PTPRF-209ENST00000438120 C1QTNF3Q9BXJ4 246 aa15.75■□□□□ 0.11
PTPRF-209ENST00000438120 MKRN2Q9H000 416 aaKnown RBP15.75■□□□□ 0.11
PTPRF-209ENST00000438120 GPR171O14626 319 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 MAGEB4O15481 346 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-209ENST00000438120 SGCEO43556 437 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 LGI1O95970 557 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 TCRBP04435 133 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 CSF3RQ99062 836 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 MRPL19P49406 292 aaKnown RBP15.74■□□□□ 0.11
PTPRF-209ENST00000438120 ADGRE4PQ86SQ3 457 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 TEAD3Q99594 435 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 CRYZL1O95825 349 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 BCKDHBP21953 392 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 ETV1P50549 477 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 ZNF74Q16587 644 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 LACC1Q8IV20 430 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 NAXDQ8IW45 347 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 MAML2Q8IZL2 1156 aaPredicted RBP15.74■□□□□ 0.11
PTPRF-209ENST00000438120 TMEM99Q8N816 258 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 MRGPRX1Q96LB2 322 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 KCNJ15Q99712 375 aa15.74■□□□□ 0.11
PTPRF-209ENST00000438120 SEC22CQ9BRL7 303 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms