RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RAD1O60671 282 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 LEFTY1O75610 366 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 SFTA3P0C7M3 94 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 NOVA1P51513 510 aaKnown RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF280AP59817 542 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 SHC2P98077 582 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 UTP4Q969X6 686 aaKnown RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 TRIB1Q96RU8 372 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 A4GALTQ9NPC4 353 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 VSX1Q9NZR4 365 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-209ENST00000437951 GPR171O14626 319 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 PRR22Q8IZ63 422 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 GPR173Q9NS66 373 aa10.68□□□□□ -0.7
PTCH1-209ENST00000437951 GASTP01350 101 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FCGR2CP31995 323 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 GPR17Q13304 367 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 KIR2DS3Q14952 304 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 UBE3DQ7Z6J8 389 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 EMG1Q92979 244 aaKnown RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SYT17Q9BSW7 474 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SCN3AQ9NY46 2000 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SCN8AQ9UQD0 1980 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 A0A087X0M5 115 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 A0A1B0GX30 115 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 OR5K3A6NET4 321 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FAM183AA6NL82 134 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SPTBP11277 2137 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 TYRP1P17643 537 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 GABRB1P18505 474 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FAM57BQ71RH2 274 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 ZFYVE21Q9BQ24 234 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 NAA50Q9GZZ1 169 aaKnown RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FTSJ1Q9UET6 329 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 RAB27BO00194 218 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 GLAP06280 429 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SLC5A12Q1EHB4 618 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 LBX2Q6XYB7 198 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 NANOGP1Q8N7R0 232 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 PIGCQ92535 297 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 RAB6CQ9H0N0 254 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 NAV1Q8NEY1 1877 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FAM171A2A8MVW0 826 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 GPR31O00270 319 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 HOXC11O43248 304 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 OR7C1O76099 320 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SORBS2O94875 1100 aaKnown RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 IL1RNP18510 177 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 IGSF11Q5DX21 431 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FAM180BQ6P0A1 224 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 UBR1Q8IWV7 1749 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 LMNTD1Q8N9Z9 388 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 GPX8Q8TED1 209 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 JAM3Q9BX67 310 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 AKAP12Q02952 1782 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 TRAV27A0A087WT01 109 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 A0A0D9SEW6 157 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 AP4M1O00189 453 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF593O00488 134 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 MAN2B1O00754 1011 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SOCS6O14544 535 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 XCR1P46094 333 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 RAB6CQ53S08 254 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 OR51S1Q8NGJ8 323 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 OR13C5Q8NGS8 318 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FIBINQ8TAL6 211 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FOXJ1Q92949 421 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 TAAR9Q96RI9 348 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 ACPTQ9BZG2 426 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 WDR61Q9GZS3 305 aaKnown RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 SERTM2A0A1B0GWG4 89 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 C7orf72A4D263 438 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 DBX1A6NMT0 343 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 PTHLHP12272 177 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 DEFA4P12838 97 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 NQO2P16083 231 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 PINX1Q96BK5 328 aaKnown RBP10.67□□□□□ -0.7
PTCH1-209ENST00000437951 FZD1Q9UP38 647 aa10.67□□□□□ -0.7
PTCH1-209ENST00000437951 A6NIN4 97 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 DOC2BQ14184 412 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 EIF4E3Q8N5X7 224 aaKnown RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 GABARAPL1Q9H0R8 117 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF814B7Z6K7 855 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 M0R1X1 148 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 FPR3P25089 353 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 SLC36A2Q495M3 483 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 GALNT16Q8N428 558 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 MTMR14Q8NCE2 650 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 CLEC4DQ8WXI8 215 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 NGBQ9NPG2 151 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 TAS2R5Q9NYW4 299 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 GPR34Q9UPC5 381 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 RD3LP0DJH9 198 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 TOMM34Q15785 309 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 AKR1E2Q96JD6 320 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 CBLCQ9ULV8 474 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 SNX11Q9Y5W9 270 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 SLC22A20A6NK97 555 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 FKBP2P26885 142 aaKnown RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 OR8G2PQ6IF36 304 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms