RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 CENPNQ96H22 339 aaPredicted RBP12.12□□□□□ -0.47
LINC01088-201ENST00000437737 C7orf34Q96L11 122 aa12.12□□□□□ -0.47
LINC01088-201ENST00000437737 SLC6A7Q99884 636 aa12.12□□□□□ -0.47
LINC01088-201ENST00000437737 POLR2J2Q9GZM3 115 aaKnown RBP12.12□□□□□ -0.47
LINC01088-201ENST00000437737 POLR2J3Q9H1A7 115 aaKnown RBP12.12□□□□□ -0.47
LINC01088-201ENST00000437737 VCX3BQ9H321 246 aa12.12□□□□□ -0.47
LINC01088-201ENST00000437737 DNAJB9Q9UBS3 223 aa12.12□□□□□ -0.47
LINC01088-201ENST00000437737 CDHR4A6H8M9 788 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 TMEM229AB2RXF0 380 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 AP3D1O14617 1153 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 ZNF208O43345 1280 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 TIPRLO75663 272 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 AKR7A3O95154 331 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 UQCRBP14927 111 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 POLR2HP52434 150 aaKnown RBP12.11□□□□□ -0.47
LINC01088-201ENST00000437737 NPRL3Q12980 569 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 DAG1Q14118 895 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 ELFN2Q5R3F8 820 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 MYPOPQ86VE0 399 aaPredicted RBP12.11□□□□□ -0.47
LINC01088-201ENST00000437737 RANBP3LQ86VV4 465 aaPredicted RBP12.11□□□□□ -0.47
LINC01088-201ENST00000437737 TMEM99Q8N816 258 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 GPR32P1Q8NGA4 272 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 ARHGDIGQ99819 225 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
LINC01088-201ENST00000437737 ENPP4Q9Y6X5 453 aa12.11□□□□□ -0.47
LINC01088-201ENST00000437737 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 ZC3H12DA2A288 527 aaKnown RBP12.1□□□□□ -0.47
LINC01088-201ENST00000437737 M0R233 179 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 WNT9BO14905 357 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 TPST1O60507 370 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 FMO6PO60774 539 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 AVPP01185 164 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 CBR1P16152 277 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 ACHEP22303 614 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 COL8A2P25067 703 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 TACR3P29371 465 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 OR1E2P47887 323 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 SELENOPP49908 381 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 RGS8P57771 180 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-201ENST00000437737 OR7A5Q15622 319 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 MRPL2Q5T653 305 aaKnown RBP12.1□□□□□ -0.47
LINC01088-201ENST00000437737 TMEM225Q6GV28 225 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 OR2T5Q6IEZ7 315 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 NIPAL3Q6P499 406 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 ZNF836Q6ZNA1 936 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 C1orf229Q6ZS94 237 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-201ENST00000437737 HMGN2P46Q86SG4 172 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 LRRC17Q8N6Y2 441 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 FAM169BQ8N8A8 192 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 ZDHHC22Q8N966 263 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 OR2T29Q8NH02 315 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 MAGEE2Q8TD90 523 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-201ENST00000437737 LRTOMTQ8WZ04 291 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 RDH5Q92781 318 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 PKP2Q99959 881 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 RACGAP1Q9H0H5 632 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 NELFAQ9H3P2 528 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 ESM1Q9NQ30 184 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 EXOSC3Q9NQT5 275 aaKnown RBP12.1□□□□□ -0.47
LINC01088-201ENST00000437737 C8orf4Q9NR00 106 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 DDX28Q9NUL7 540 aaKnown RBP12.1□□□□□ -0.47
LINC01088-201ENST00000437737 NDUFAF4Q9P032 175 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 REV1Q9UBZ9 1251 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 OSGIN1Q9UJX0 560 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 CMAHPQ9Y471 501 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 TRRAPQ9Y4A5 3859 aa12.1□□□□□ -0.47
LINC01088-201ENST00000437737 AQP7P3A6NL99 342 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 PPIHO43447 177 aaKnown RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 SYNGR3O43761 229 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 UPK3AO75631 287 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 HPXP02790 462 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 SH3BGRP55822 239 aaPredicted RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 UBA52P62987 128 aaKnown RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 MYBPC1Q00872 1141 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 POU3F1Q03052 451 aaPredicted RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 LINGO2Q7L985 606 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 C1QL2Q7Z5L3 287 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 CLIP4Q8N3C7 705 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 VANGL1Q8TAA9 524 aaPredicted RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 OSBPL10Q9BXB5 764 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 MRPL37Q9BZE1 423 aaKnown RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 VCXQ9H320 206 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 MS4A5Q9H3V2 200 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 REEP1Q9H902 201 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 NOX3Q9HBY0 568 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 CRLF2Q9HC73 371 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 ZNF275Q9NSD4 429 aaPredicted RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 TESQ9UGI8 421 aaKnown RBP12.09□□□□□ -0.47
LINC01088-201ENST00000437737 PPIAL4AQ9Y536 164 aa12.09□□□□□ -0.47
LINC01088-201ENST00000437737 A0A0G2JMP0 313 aa12.08□□□□□ -0.48
LINC01088-201ENST00000437737 A0A0X1KG70 313 aa12.08□□□□□ -0.48
LINC01088-201ENST00000437737 CLDN24A6NM45 220 aa12.08□□□□□ -0.48
LINC01088-201ENST00000437737 CASQ2O14958 399 aaPredicted RBP12.08□□□□□ -0.48
LINC01088-201ENST00000437737 E2F6O75461 281 aa12.08□□□□□ -0.48
LINC01088-201ENST00000437737 HKR1P10072 659 aa12.08□□□□□ -0.48
LINC01088-201ENST00000437737 THRBP10828 461 aa12.08□□□□□ -0.48
LINC01088-201ENST00000437737 ADRA2CP18825 462 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms