RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 NARFLQ9H6Q4 476 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 SUDS3Q9H7L9 328 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 GORASP2Q9H8Y8 452 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 SLC25A22Q9H936 323 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 FOLH1BQ9HBA9 442 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 PATZ1Q9HBE1 687 aaKnown RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 PLGRKTQ9HBL7 147 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 SMPD3Q9NY59 655 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 TREM2Q9NZC2 230 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 KIF25Q9UIL4 384 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 ASF1AQ9Y294 204 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 NEUROG3Q9Y4Z2 214 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 TIMM10BQ9Y5J6 103 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 V9GY05 133 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 PTPRZ1P23471 2315 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 GPR179Q6PRD1 2367 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 ELP1O95163 1332 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 EP300Q09472 2414 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 ASH1LQ9NR48 2969 aaKnown RBP1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 DOCK8Q8NF50 2099 aa1.86□□□□□ -2.11
HMGB1P31-201ENST00000437242 FASNP49327 2511 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 IGLV3-16A0A075B6K0 115 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 PSMB11A5LHX3 300 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 LOC110117498-PIK3R3F6TDL0 507 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 HIP1O00291 1037 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 ABCD4O14678 606 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 MED7O43513 233 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 RAMP3O60896 148 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CLDN9O95484 217 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 LGI1O95970 557 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CCDC130P13994 396 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 FUT3P21217 361 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CMA1P23946 247 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 COX7A1P24310 79 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CD1BP29016 333 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 IL12AP29459 219 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 PRDX3P30048 256 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 SHMT2P34897 504 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 DUSP3P51452 185 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 KPNA2P52292 529 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 ARFIP1P53367 373 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 APOC4P55056 127 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 NUP107P57740 925 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 RPS14P62263 151 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CCNA1P78396 465 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 SIGLEC14Q08ET2 396 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 GRB7Q14451 532 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 HERPUD1Q15011 391 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 NSDHLQ15738 373 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 SAMD4BQ5PRF9 694 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 C1orf100Q5SVJ3 147 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 GPRC6AQ5T6X5 926 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 OR4F3Q6IEY1 312 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CASC1Q6TDU7 716 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 IL34Q6ZMJ4 242 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 MFSD9Q8NBP5 474 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 FAM83FQ8NEG4 500 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 SDR42E1Q8WUS8 393 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 UBE2E3Q969T4 207 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 PAGE5Q96GU1 130 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 RPRD1AQ96P16 312 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 RBM14Q96PK6 669 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 TGS1Q96RS0 853 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 NRIP2Q9BQI9 281 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 TMEM43Q9BTV4 400 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CAPS2Q9BXY5 557 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 SLC25A39Q9BZJ4 359 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 POLR2J2Q9GZM3 115 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 POLR2J3Q9H1A7 115 aaKnown RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 VCX2Q9H322 139 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 RANBP3Q9H6Z4 567 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 VCPKMTQ9H867 229 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 LRRC40Q9H9A6 602 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 NANOGQ9H9S0 305 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 RAB18Q9NP72 206 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 CDH9Q9ULB4 789 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 TMCO1Q9UM00 188 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 MEMO1Q9Y316 297 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 KIF26AQ9ULI4 1882 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 MYH6P13533 1939 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 LAMA5O15230 3695 aa1.85□□□□□ -2.11
HMGB1P31-201ENST00000437242 PDCD11Q14690 1871 aaKnown RBP1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 LAMA1P25391 3075 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 IGSF10Q6WRI0 2623 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 DSPP15924 2871 aaKnown RBP1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 CCDC182A6NF36 153 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 MPHOSPH10O00566 681 aaKnown RBP1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 ZNF208O43345 1280 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 SUPT7LO94864 414 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 DIRAS1O95057 198 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 STAMBPO95630 424 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 PRB1P04280 392 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 KLK3P07288 261 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 ZNF286BP0CG31 522 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 RBMY1CP0DJD4 496 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 PSG2P11465 335 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 HTR1EP28566 365 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 GNA11P29992 359 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 DDOSTP39656 456 aa1.84□□□□□ -2.11
HMGB1P31-201ENST00000437242 GLP1RP43220 463 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms