RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CT45A2Q5DJT8 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CT45A1Q5HYN5 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 Q6ZSR9 355 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CT45A3Q8NHU0 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 SECTM1Q8WVN6 248 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 LIPHQ8WWY8 451 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 H1FXQ92522 213 aaKnown RBP14.57□□□□□ -0.08
PTPN13-204ENST00000436978 TMIGD2Q96BF3 282 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 HIF1ANQ9NWT6 349 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 A0A0U1RQK1 487 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 AKR1C1Q04828 323 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 PAN3Q58A45 887 aaKnown RBP14.57□□□□□ -0.08
PTPN13-204ENST00000436978 TBPL2Q6SJ96 375 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 PAQR8Q8TEZ7 354 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 C11orf40Q8WZ69 217 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 UTP4Q969X6 686 aaKnown RBP14.57□□□□□ -0.08
PTPN13-204ENST00000436978 PCED1AQ9H1Q7 454 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 RCE1Q9Y256 329 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 HSPB2A8KAH6 182 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 HNRNPFP52597 415 aaKnown RBP14.57□□□□□ -0.08
PTPN13-204ENST00000436978 HSPB2Q16082 182 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 OR2G6Q5TZ20 316 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 OR6V1Q8N148 313 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 TMEM202A6NGA9 273 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 ACOD1A6NK06 481 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 SNAPINO95295 136 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 MAKP20794 623 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 MAP2K6P52564 334 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 SPEM1Q8N4L4 309 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 OR6M1Q8NGM8 313 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 OR13C9Q8NGT0 318 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 OR10J5Q8NHC4 309 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 FGF22Q9HCT0 170 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 P2RY10O00398 339 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 LINC00346Q8IVM7 164 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 BBS1Q8NFJ9 593 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 FRZBQ92765 325 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 LINC00615Q96LM1 132 aaPredicted RBP14.57□□□□□ -0.08
PTPN13-204ENST00000436978 PSD2Q9BQI7 771 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 FKRPQ9H9S5 495 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 POU3F3P20264 500 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 HEPHL1Q6MZM0 1159 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF355PQ9NSJ1 428 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 TBX21Q9UL17 535 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 KRBA1A5PL33 1030 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 GSTP1P09211 210 aaKnown RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 TEKQ02763 1124 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 YARS2Q9Y2Z4 477 aaKnown RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 ADAMTS7Q9UKP4 1686 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 SDHBP21912 280 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 SLC9A3R2Q15599 337 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 OR52W1Q6IF63 320 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 TCTEX1D2Q8WW35 142 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 TRDV1A0A1B0GX56 115 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 PRRT4C9JH25 899 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 DUSP5Q16690 384 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 LTC4SQ16873 150 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 STEAP3Q658P3 488 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 RBMS3Q6XE24 437 aaKnown RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF775Q96BV0 537 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 RASD2Q96D21 266 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF891A8MT65 544 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 PTBP1P26599 531 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 LHFPL2Q6ZUX7 228 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 SLC46A3Q7Z3Q1 461 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 LILRA2Q8N149 483 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 CNTNAP3Q9BZ76 1288 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 ANKRD10Q9NXR5 420 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 LOXL2Q9Y4K0 774 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 OR8U8P0C7N1 319 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 TRIM23P36406 574 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 CPEB2Q7Z5Q1 589 aaKnown RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 MAFAQ8NHW3 353 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 TNFSF12O43508 249 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 PPIAP62937 165 aaKnown RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 MC2RQ01718 297 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 MEP1BQ16820 701 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 GLYR1Q49A26 553 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 CAMKMTQ7Z624 323 aa14.56□□□□□ -0.08
PTPN13-204ENST00000436978 CISD2Q8N5K1 135 aaKnown RBP14.56□□□□□ -0.08
PTPN13-204ENST00000436978 THSD7AQ9UPZ6 1657 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 PIP5K1CO60331 668 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 SLC10A1Q14973 349 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF486Q96H40 463 aaPredicted RBP14.55□□□□□ -0.08
PTPN13-204ENST00000436978 DUSP13Q9UII6 198 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 OR51B4Q9Y5P0 310 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF831Q5JPB2 1677 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 TDRD6O60522 2096 aaKnown RBP14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF254O75437 659 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 PPP3CBP16298 524 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 AADACP22760 399 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 FAM53BQ14153 422 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 GALEQ14376 348 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 SPCS2Q15005 226 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 DPPA2Q7Z7J5 298 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ISYNA1Q9NPH2 558 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 IDSB3KWA1 339 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 ELK1P19419 428 aa14.55□□□□□ -0.08
PTPN13-204ENST00000436978 CATSPERDQ86XM0 798 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms