RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 TMEM239Q8WW34 195 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 RDH5Q92781 318 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 NMD3Q96D46 503 aaKnown RBP12.3□□□□□ -0.44
LINC01006-204ENST00000435354 SGTBQ96EQ0 304 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 TSPAN32Q96QS1 320 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 UGT2A1Q9Y4X1 527 aa12.3□□□□□ -0.44
LINC01006-204ENST00000435354 IGLV3-9A0A075B6K5 115 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 IGKV1D-43A0A0B4J1Z2 117 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 MCIDASD6RGH6 385 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 WNT9BO14905 357 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 RP2O75695 350 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 SLC2A10O95528 541 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 SNAP29O95721 258 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 CLPTM1O96005 669 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 ZNF250P15622 560 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 ACADSP16219 412 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 FUT4P22083 530 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 ACHEP22303 614 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 DAP3P51398 398 aaKnown RBP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 ERVS71-1P61550 626 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 SF3A3Q12874 501 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 ALKBH6Q3KRA9 238 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 SLC36A2Q495M3 483 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 CYBRD1Q53TN4 286 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 C10orf128Q5T292 105 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 RGS7BPQ6MZT1 257 aaPredicted RBP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 ERICH5Q6P6B1 374 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 SLC16A14Q7RTX9 510 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 DPPA2Q7Z7J5 298 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 RBM15BQ8NDT2 890 aaKnown RBP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 LIPHQ8WWY8 451 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 POLR2J2Q9GZM3 115 aaKnown RBP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 POLR2J3Q9H1A7 115 aaKnown RBP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 OR51B6Q9H340 312 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 RNF121Q9H920 327 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 CDH20Q9HBT6 801 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 ZNF275Q9NSD4 429 aaPredicted RBP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 FGFR1OP2Q9NVK5 253 aa12.29□□□□□ -0.44
LINC01006-204ENST00000435354 TMEFF2Q9UIK5 374 aaPredicted RBP12.29□□□□□ -0.44
LINC01006-204ENST00000435354 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 CENPBD1B2RD01 187 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 PIP5K1CO60331 668 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 NPPAP01160 153 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 THRBP10828 461 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 CDAP32320 146 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 MAGEB1P43366 347 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 GPR6P46095 362 aaPredicted RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 ZNF84P51523 738 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 DVL1P1P54792 670 aaPredicted RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 MRPS11P82912 194 aaKnown RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 FMODQ06828 376 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 MMEL1Q495T6 779 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 LRRC18Q8N456 261 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 CPEB3Q8NE35 698 aaKnown RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 NABP1Q96AH0 204 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 C1orf198Q9H425 327 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 NARFLQ9H6Q4 476 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 HINT3Q9NQE9 182 aaKnown RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 ARGLU1Q9NWB6 273 aaPredicted RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 ZNF346Q9UL40 294 aaKnown RBP12.28□□□□□ -0.44
LINC01006-204ENST00000435354 MED31Q9Y3C7 131 aa12.28□□□□□ -0.44
LINC01006-204ENST00000435354 LOC100653049A0A140TA62 436 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 NPIPB13A6NJU9 1138 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 C17orf100A8MU93 164 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 FAM220BPB1ANY3 271 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 FAM157AC9JC47 383 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 NPIPB4C9JG80 1138 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 KRT34O76011 436 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 IFNA14P01570 189 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 VIMP08670 466 aaKnown RBP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 TROVE2P10155 538 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 SAGP10523 405 aaPredicted RBP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 KDELR2P33947 212 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 ARFIP2P53365 341 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 UCP2P55851 309 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 KLF3P57682 345 aaPredicted RBP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 MRPS34P82930 218 aaKnown RBP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 NKPD1Q17RQ9 610 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 TBC1D28Q2M2D7 210 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 LRRC23Q53EV4 343 aaPredicted RBP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 PABPC1L2AQ5JQF8 200 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 UGT2A3Q6UWM9 527 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 HDDC2Q7Z4H3 204 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 ZNF519Q8TB69 540 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 SYNPRQ8TBG9 265 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 GTF3AQ92664 365 aaKnown RBP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 SIAEQ9HAT2 523 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 TREM2Q9NZC2 230 aa12.27□□□□□ -0.45
LINC01006-204ENST00000435354 GMPR2Q9P2T1 348 aaKnown RBP12.27□□□□□ -0.45
LINC01006-204ENST00000435354 A4GNTQ9UNA3 340 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms