RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 OR11G2Q8NGC1 345 aa16.76■□□□□ 0.27
CLK1-205ENST00000434813 OR51A4Q8NGJ6 313 aa16.76■□□□□ 0.27
CLK1-205ENST00000434813 HGDQ93099 445 aa16.76■□□□□ 0.27
CLK1-205ENST00000434813 MCHR2Q969V1 340 aa16.76■□□□□ 0.27
CLK1-205ENST00000434813 ZNF768Q9H5H4 540 aaKnown RBP16.76■□□□□ 0.27
CLK1-205ENST00000434813 ING1Q9UK53 422 aaPredicted RBP16.76■□□□□ 0.27
CLK1-205ENST00000434813 CCDC163A0A0D9SF12 145 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 ANKRD20A5PA0PJZ0 165 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 ACOT7O00154 380 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 GIMD1P0DJR0 217 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 CXCL3P19876 107 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 CSRP1P21291 193 aaKnown RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 TAS2R20P59543 309 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 RPS15P62841 145 aaKnown RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 SLC17A1Q14916 467 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 TMEM255AQ5JRV8 349 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 ZNF782Q6ZMW2 699 aaPredicted RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 COX15Q7KZN9 410 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 LUZP2Q86TE4 346 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 MISPQ8IVT2 679 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 NECAB3Q96P71 396 aaPredicted RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 MRPL15Q9P015 296 aaKnown RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 MEIKINA0A087WXM9 373 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 A0A1B0GVI7 797 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 PRAF2O60831 178 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 KHDRBS3O75525 346 aaKnown RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 AHSA1O95433 338 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 HLA-DQA2P01906 255 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 PSMB1P20618 241 aaKnown RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 HOXA6P31267 233 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 ROM1Q03395 351 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 MEP1BQ16820 701 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 LYSMD4Q5XG99 296 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 SLC18B1Q6NT16 456 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 DNM1P46Q6ZS02 220 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 ZNF679Q8IYX0 411 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 TGIF2Q9GZN2 237 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 ELOVL3Q9HB03 270 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 MRPL22Q9NWU5 206 aaKnown RBP16.75■□□□□ 0.27
CLK1-205ENST00000434813 KLK11Q9UBX7 282 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 STEAP1Q9UHE8 339 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 SRPK3Q9UPE1 567 aa16.75■□□□□ 0.27
CLK1-205ENST00000434813 PLPP3O14495 311 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 MAS1P04201 325 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 HTR2BP41595 481 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 DHPSP49366 369 aaPredicted RBP16.74■□□□□ 0.27
CLK1-205ENST00000434813 ARRB1P49407 418 aaPredicted RBP16.74■□□□□ 0.27
CLK1-205ENST00000434813 RNF4P78317 190 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 TEX30Q5JUR7 227 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 SFRP4Q6FHJ7 346 aaPredicted RBP16.74■□□□□ 0.27
CLK1-205ENST00000434813 KANSL1Q7Z3B3 1105 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 RNF128Q8TEB7 428 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 ATOH1Q92858 354 aaPredicted RBP16.74■□□□□ 0.27
CLK1-205ENST00000434813 SLC22A23A1A5C7 686 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 OR2T1O43869 369 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 SLC16A7O60669 478 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 OR6A2O95222 327 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 TGM6O95932 706 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 MYF5P13349 255 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 CTLA4P16410 223 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 SLC26A5P58743 744 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 ZXDAP98168 799 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 SLC35D2Q76EJ3 337 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 ZNF431Q8TF32 576 aaPredicted RBP16.74■□□□□ 0.27
CLK1-205ENST00000434813 TSEN15Q8WW01 171 aaKnown RBP16.74■□□□□ 0.27
CLK1-205ENST00000434813 SNAPC3Q92966 411 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 MS4A3Q96HJ5 214 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 ZNF587Q96SQ5 575 aaPredicted RBP16.74■□□□□ 0.27
CLK1-205ENST00000434813 NUDT22Q9BRQ3 303 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 ULBP3Q9BZM4 244 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 SEMA4CQ9C0C4 833 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 OR11A1Q9GZK7 315 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 SLC22A11Q9NSA0 550 aa16.74■□□□□ 0.27
CLK1-205ENST00000434813 SEC16AO15027 2179 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 RP1P56715 2156 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 TTLL8A6PVC2 850 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 FTCDNL1E5RQL4 147 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 ERVH48-1M5A8F1 160 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 GLSO94925 669 aaPredicted RBP16.73■□□□□ 0.27
CLK1-205ENST00000434813 SPARCP09486 303 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 SDHBP21912 280 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 ODF4Q2M2E3 257 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 COL28A1Q2UY09 1125 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 RHBDD2Q6NTF9 364 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 BEST4Q8NFU0 473 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 OR6S1Q8NH40 331 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 DUSP19Q8WTR2 217 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 TMEM234Q8WY98 164 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 DACT3Q96B18 629 aaPredicted RBP16.73■□□□□ 0.27
CLK1-205ENST00000434813 C8orf44Q96CB5 159 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 GPR137Q96N19 417 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 MGAT4AQ9UM21 535 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 NPTNQ9Y639 398 aa16.73■□□□□ 0.27
CLK1-205ENST00000434813 IGLV3-12A0A075B6K2 115 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 A0A1B0GUH1 482 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 SSNA1O43805 119 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 PDGFBP01127 241 aaPredicted RBP16.72■□□□□ 0.27
CLK1-205ENST00000434813 SYPP08247 313 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 KCTD18Q6PI47 426 aaPredicted RBP16.72■□□□□ 0.27
CLK1-205ENST00000434813 SEZ6L2Q6UXD5 910 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms