RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OR4C5Q8NGB2 326 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 KIR2DL5BQ8NHK3 375 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 SMARCD2Q92925 531 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMEM101Q96IK0 257 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 B3GALT6Q96L58 329 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 IFT74Q96LB3 600 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR8B4Q96RC9 309 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TGS1Q96RS0 853 aaKnown RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 RIOK1Q9BRS2 568 aaKnown RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 IL26Q9NPH9 171 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 DAZ3Q9NR90 486 aaKnown RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 RAB20Q9NX57 234 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 TREM2Q9NZC2 230 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 XCL2Q9UBD3 114 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 B4GALT7Q9UBV7 327 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 ASF1AQ9Y294 204 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF256Q9Y2P7 627 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 ROCK2O75116 1388 aaKnown RBP2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF609O15014 1411 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 MYO3BQ8WXR4 1341 aa2.17□□□□□ -2.06
HMGB1P27-201ENST00000431429 UNC80Q8N2C7 3258 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 BRCA1P38398 1863 aaKnown RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ADAMTSL1Q8N6G6 1762 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TRBV11-1A0A0K0K1C0 115 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ERI2A8K979 691 aaKnown RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMEM110-MUSTN1A8MSY1 372 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 C12orf77C9JDV5 145 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 PANO1I0J062 215 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 HIP1O00291 1037 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 CCL21O00585 134 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 AGPAT2O15120 278 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 FAM189A1O60320 539 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 MMP23AO75900 390 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TSPAN13O95857 204 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 C2P06681 752 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 CHTF8P0CG12 524 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TOP1P11387 765 aaKnown RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TDGF1P13385 188 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 KLK2P20151 261 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ATP6V1B2P21281 511 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 GLP1RP43220 463 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ARRB1P49407 418 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 GPM6AP51674 278 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TDGF1P3P51864 188 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 PRRX1P54821 245 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 CDH6P55285 790 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 SELENOTP62341 195 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ERVK-25P63136 954 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 NDPQ00604 133 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TGM3Q08188 693 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 SLC39A6Q13433 755 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 MARCH8Q5T0T0 291 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 FHL5Q5TD97 284 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 LRRC74BQ6ZQY2 392 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 RNF165Q6ZSG1 346 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 UTS2BQ765I0 119 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 NIPA1Q7RTP0 329 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 SCD5Q86SK9 330 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TGIF2LYQ8IUE0 185 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF100Q8IYN0 542 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF557Q8N988 423 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR6C4Q8NGE1 309 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 GPR151Q8TDV0 419 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ACMSDQ8TDX5 336 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 RPUSD4Q96CM3 377 aaKnown RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 FCRL1Q96LA6 429 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 TSG101Q99816 390 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR11A1Q9GZK7 315 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 SRMSQ9H3Y6 488 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 ANKRA2Q9H9E1 313 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 CCL28Q9NRJ3 127 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 PLSCR3Q9NRY6 295 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 CALYQ9NYX4 217 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 PSMC3IPQ9P2W1 217 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 N6AMT1Q9Y5N5 214 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 WNK3Q9BYP7 1800 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 RANBP2P49792 3224 aaKnown RBP2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 DOT1LQ8TEK3 1739 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 KIAA1551Q9HCM1 1747 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 VCANP13611 3396 aa2.16□□□□□ -2.06
HMGB1P27-201ENST00000431429 QRICH2Q9H0J4 1663 aa2.15□□□□□ -2.06
HMGB1P27-201ENST00000431429 FAM208AQ9UK61 1670 aaKnown RBP2.15□□□□□ -2.06
HMGB1P27-201ENST00000431429 TAF1LQ8IZX4 1826 aa2.15□□□□□ -2.06
HMGB1P27-201ENST00000431429 TIAM2Q8IVF5 1701 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 TDRD6O60522 2096 aaKnown RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CCL15-CCL14A0A0B4J2E2 113 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 A8MUA0 341 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 MRPS12O15235 138 aaKnown RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 RNF13O43567 381 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 PSTPIP1O43586 416 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 TRAF3IP2O43734 574 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 CHST1O43916 411 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 SUPT7LO94864 414 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 OR2F2O95006 317 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 SERPIND1P05546 499 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ZNF19P17023 458 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 ELK1P19419 428 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 GALP22466 123 aa2.15□□□□□ -2.07
HMGB1P27-201ENST00000431429 COX7A1P24310 79 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms