RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 PYROXD2Q8N2H3 581 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ZCCHC7Q8N3Z6 543 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 NFAM1Q8NET5 270 aaPredicted RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 OR10G7Q8NGN6 311 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 OR5H6Q8NGV6 325 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 OR52N1Q8NH53 320 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 RAB3IL1Q8TBN0 382 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 FBXO25Q8TCJ0 367 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PDCD6IPQ8WUM4 868 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 KCTD4Q8WVF5 259 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 C10orf82Q8WW14 230 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 TMEM190Q8WZ59 177 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UFD1Q92890 307 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 YIPF5Q969M3 257 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ISOC1Q96CN7 298 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HPDLQ96IR7 371 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PIWIL1Q96J94 861 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 FAM218AQ96MZ4 157 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF300Q96RE9 604 aaPredicted RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF607Q96SK3 696 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 BCL7BQ9BQE9 202 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 TBCDQ9BTW9 1192 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 NLNQ9BYT8 704 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 SLC19A3Q9BZV2 496 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CXXC4Q9H2H0 198 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 GORASP2Q9H8Y8 452 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 MED20Q9H944 212 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UGT1A7Q9HAW7 530 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UGT1A10Q9HAW8 530 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 UGT1A8Q9HAW9 530 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 HMG20AQ9NP66 347 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PRSS16Q9NQE7 514 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PISDQ9UG56 409 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CYB5R1Q9UHQ9 305 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 CYTH4Q9UIA0 394 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 ENPP5Q9UJA9 477 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PURGQ9UJV8 347 aaKnown RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 SPATA2Q9UM82 520 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 PLCL2Q9UPR0 1127 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 GON4LQ3T8J9 2241 aa3.44□□□□□ -1.86
HMGB3-203ENST00000430118 USP9YO00507 2555 aaPredicted RBP3.44□□□□□ -1.86
HMGB3-203ENST00000430118 FLNCQ14315 2725 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 LOC105371242A0A075B767 164 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 A0A0A6YYD4 124 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PPIAL4CA0A0B4J2A2 164 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 A0A1W2PR80 420 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 A0A1W2PRG6 482 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 LINC00862A6NCI5 91 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 OR5H15A6NDH6 313 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PMS2P5A8MQ11 134 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 BTNL10A8MVZ5 291 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PPIAL4DF5H284 164 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 K7EQD1 137 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 UBXN8O00124 270 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 NDUFS8O00217 210 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PSMD12O00232 456 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 GYG2O15488 501 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 RAD51CO43502 376 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 B4GAT1O43505 415 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 BCAS1O75363 584 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 TM7SF2O76062 418 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 TOXO94900 526 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PTTG1O95997 202 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 CSF2P04141 144 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 RPLP0P05388 317 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 ANXA4P09525 319 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 HSMCR30P0CW71 290 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SMIM6P0DI80 62 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PPIAL4GP0DN37 164 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 CLUP10909 449 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 RPA2P15927 270 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 IL12AP29459 219 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SERPINB1P30740 379 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 CHI3L1P36222 383 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 DDOSTP39656 456 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SYKP43405 635 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 YAP1P46937 504 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 UQCRFS1P47985 274 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PPT1P50897 306 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 AP1S1P61966 158 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 YWHAEP62258 255 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 GTF2BQ00403 316 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 BST2Q10589 180 aaKnown RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SLC17A1Q14916 467 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 TGIF1Q15583 401 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 TRIP10Q15642 601 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SGCAQ16586 387 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SFT2D3Q587I9 215 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 DMKNQ6E0U4 476 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 STEAP1BQ6NZ63 245 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 ATRAIDQ6UW56 229 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 Q71RC1 249 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 PLCZ1Q86YW0 608 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 ZNF679Q8IYX0 411 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 CLEC4FQ8N1N0 589 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SLC25A45Q8N413 288 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.43□□□□□ -1.86
HMGB3-203ENST00000430118 ACTRT1Q8TDG2 376 aa3.43□□□□□ -1.86
HMGB3-203ENST00000430118 MRGPRDQ8TDS7 321 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms