RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 NKAIN1Q4KMZ8 207 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 MZT2BQ6NZ67 158 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 SOSTQ9BQB4 213 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 PPP1R3EQ9H7J1 279 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 EMC7Q9NPA0 242 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 ST6GALNAC2Q9UJ37 374 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 RCE1Q9Y256 329 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 ZNF337Q9Y3M9 751 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 AKAP13Q12802 2813 aa7.55□□□□□ -1.2
CD44-208ENST00000428726 TMED7-TICAM2A0A0A6YYA0 188 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 PLATP00750 562 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 SRMP19623 302 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 DCTDP32321 178 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ARHGDIBP52566 201 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 RRAS2P62070 204 aaPredicted RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 RPS11P62280 158 aaKnown RBP eCLIP7.54□□□□□ -1.2
CD44-208ENST00000428726 MFGE8Q08431 387 aaPredicted RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 COL19A1Q14993 1142 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 WBP2NLQ6ICG8 309 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 MAMSTRQ6ZN01 415 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 OR11H7Q8NGC8 314 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 OR52B4Q8NGK2 314 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 OR5D18Q8NGL1 313 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 C1orf216Q8TAB5 229 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ADIPOR1Q96A54 375 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 RFT1Q96AA3 541 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ZNF501Q96CX3 271 aaPredicted RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 CMBLQ96DG6 245 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 GFI1Q99684 422 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 PELOQ9BRX2 385 aaKnown RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 TAS2R5Q9NYW4 299 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ZNF224Q9NZL3 707 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TMED7Q9Y3B3 224 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 SPEF1Q9Y4P9 236 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TMEM131Q92545 1883 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 KALRNO60229 2985 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 LILRA5A6NI73 299 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ZNF814B7Z6K7 855 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TSPAN4O14817 238 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ORC5O43913 435 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 PPM1BO75688 479 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 RGS11O94810 467 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 CD14P08571 375 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 GP1BBP13224 206 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 AP2S1P53680 142 aaPredicted RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 RNF4P78317 190 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 RIN1Q13671 783 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 LINC01590Q5TEZ4 76 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 C9orf135Q5VTT2 229 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 BOLLQ8N9W6 283 aaKnown RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 OR52I2Q8NH67 350 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 MR1Q95460 341 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 CCDC74BQ96LY2 380 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ZNF285Q96NJ3 590 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TMEM43Q9BTV4 400 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 NRIP3Q9NQ35 241 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 KLHL21Q9UJP4 597 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 EMC9Q9Y3B6 208 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 PCDHGB7Q9Y5F8 929 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 A0A0G2JK05 382 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 A0A1B0GX78 115 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 A0A1W2PPL8 197 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 CENPBD1B2RD01 187 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 C3orf80F5H4A9 247 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 CFDP00746 253 aaPredicted RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 HLA-DQB1P01920 261 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 PATE4P0C8F1 98 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 GLB1P16278 677 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ADRA2CP18825 462 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 NPR2P20594 1047 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 GALNSP34059 522 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 THBS2P35442 1172 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 RBMXP38159 391 aaKnown RBP7.54□□□□□ -1.2
CD44-208ENST00000428726 PPICP45877 212 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 DIO1P49895 249 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 EMP2P54851 167 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 FOXF1Q12946 379 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 MAB21L1Q13394 359 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 SERTAD2Q14140 314 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TCTE1Q5JU00 501 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 CDCP2Q5VXM1 449 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 FAM198BQ6UWH4 519 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 NAA40Q86UY6 237 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TPRA1Q86W33 373 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ADGRG3Q86Y34 549 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ZNF440Q8IYI8 595 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ZNF687Q8N1G0 1237 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TOMM5Q8N4H5 51 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ZNF527Q8NB42 609 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 OR4D10Q8NGI6 311 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 OR5B2Q96R09 309 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 SEC22CQ9BRL7 303 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 METTL7AQ9H8H3 244 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 TCF7L1Q9HCS4 588 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 ICAM5Q9UMF0 924 aa7.54□□□□□ -1.2
CD44-208ENST00000428726 SVEP1Q4LDE5 3571 aa7.53□□□□□ -1.2
CD44-208ENST00000428726 TRAPPC2P0DI81 140 aa7.53□□□□□ -1.2
CD44-208ENST00000428726 TRAPPC2BP0DI82 140 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms