RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OR56A1Q8NGH5 318 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 OR2G2Q8NGZ5 317 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 GPBAR1Q8TDU6 330 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ZFPM2Q8WW38 1151 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 LRIG1Q96JA1 1093 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ZC3H10Q96K80 434 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 TMEM68Q96MH6 324 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 SDF2Q99470 211 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ADAM2Q99965 735 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 ZNF471Q9BX82 626 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 MED20Q9H944 212 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 KRCC1Q9NPI7 259 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 DECR2Q9NUI1 292 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 GDE1Q9NZC3 331 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 RPH3AQ9Y2J0 694 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 ZFYVE26Q68DK2 2539 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 TSPAN11A1L157 253 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 H0YIZ8 118 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CYB5AP00167 134 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CRYABP02511 175 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 NFYBP25208 207 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 FNTBP49356 437 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 DVL1P1P54792 670 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 DEFA6Q01524 100 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 IER5LQ5T953 404 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 MTFR2Q6P444 385 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 WDSUB1Q8N9V3 476 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 OR6X1Q8NH79 312 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 SCAMP4Q969E2 229 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 RRNAD1Q96FB5 475 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 HS6ST2Q96MM7 605 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CDCA3Q99618 268 aaPredicted RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 NUDT16L1Q9BRJ7 211 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 ELAC1Q9H777 363 aaKnown RBP4.67□□□□□ -1.66
RIF1-203ENST00000428287 IL21RQ9HBE5 538 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 DOK5Q9P104 306 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 PPP4R1LQ9P1A2 415 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 CACFD1Q9UGQ2 172 aa4.67□□□□□ -1.66
RIF1-203ENST00000428287 GPR37O15354 613 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 ZNF208O43345 1280 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 CDC40O60508 579 aaKnown RBP eCLIP4.66□□□□□ -1.66
RIF1-203ENST00000428287 PAPLNO95428 1278 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 F13BP05160 661 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 AKAIN1P0CW23 69 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 TMIGD3P0DMS9 266 aaPredicted RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 HIST1H1TP22492 207 aaPredicted RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 RAB4BP61018 213 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 ELOCQ15369 112 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 ARHGAP11AQ6P4F7 1023 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 AMZ2Q86W34 360 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 NUDT13Q86X67 352 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 SLC16A11Q8NCK7 471 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 MED8Q96G25 268 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 CRB3Q9BUF7 120 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 UNKLQ9H9P5 680 aaKnown RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 CLDND1Q9NY35 253 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 UPB1Q9UBR1 384 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 B4GALT6Q9UBX8 382 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 NOD1Q9Y239 953 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 HIF3AQ9Y2N7 669 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 J3QLW9 94 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 TIMP2P16035 220 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 ZNF19P17023 458 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 RAB5AP20339 215 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 SLC26A5P58743 744 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 STXBP1P61764 594 aaKnown RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 RAP1AP62834 184 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 PRDX1Q06830 199 aaKnown RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 Q499Y3 187 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 BTNL8Q6UX41 500 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 M1APQ8TC57 530 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 WDR45Q9Y484 360 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 KANTRA0A1W2PQU2 76 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 GXYLT2A0PJZ3 443 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 C17orf102A2RUQ5 167 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 FADS1O60427 444 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 FAM3AP98173 230 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 SORDQ00796 357 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 PCGF3Q3KNV8 242 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 DCUN1D3Q8IWE4 304 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 TMEM229BQ8NBD8 167 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 DUSP19Q8WTR2 217 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 NUDCD2Q8WVJ2 157 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 SKA2Q8WVK7 121 aaPredicted RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 TMEM239Q8WW34 195 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 ZNF707Q96C28 371 aaPredicted RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 BPIFA2Q96DR5 249 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 NMES1Q9C002 83 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 SYT4Q9H2B2 425 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 RHOFQ9HBH0 211 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 A0A1W2PR48 441 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 C7orf77A4D0Y5 90 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 FBXO24O75426 580 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 AKR1C2P52895 323 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 SLC25A1P53007 311 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 AKR1C1Q04828 323 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 MAMDC2Q7Z304 686 aaPredicted RBP4.66□□□□□ -1.66
RIF1-203ENST00000428287 OR52E1Q8NGJ3 308 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 ZNF417Q8TAU3 575 aa4.66□□□□□ -1.66
RIF1-203ENST00000428287 LIPHQ8WWY8 451 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms