RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ZBED5Q49AG3 693 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 KRT80Q6KB66 452 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 SLC25A47Q6Q0C1 308 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 TMPRSS11FQ6ZWK6 438 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 PIWIL3Q7Z3Z3 882 aaKnown RBP12.88□□□□□ -0.35
RTN4-210ENST00000427710 CCDC36Q8IYA8 594 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 MAPK1IP1LQ8NDC0 245 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 ZNF519Q8TB69 540 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 BCAS4Q8TDM0 211 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
RTN4-210ENST00000427710 NMD3Q96D46 503 aaKnown RBP12.88□□□□□ -0.35
RTN4-210ENST00000427710 C18orf12Q96KH6 178 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 KCNK17Q96T54 332 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 FUZQ9BT04 418 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 ANKRD19PQ9H560 264 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 RNF121Q9H920 327 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 CA10Q9NS85 328 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 AURKCQ9UQB9 309 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 UGT2A1Q9Y4X1 527 aa12.88□□□□□ -0.35
RTN4-210ENST00000427710 HTR3EA5X5Y0 456 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 IMPA2O14732 288 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 LY6HO94772 140 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 UBL3O95164 117 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 GADD45GO95257 159 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 RAB36O95755 333 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 FABP3P05413 133 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 INHBBP09529 407 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 OR8G3PP0DMU2 310 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 CCL2P13500 99 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 PAX7P23759 505 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 RRM2P31350 389 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 LIMS1P48059 325 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 MS4A2Q01362 244 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 SNTB2Q13425 540 aaKnown RBP12.87□□□□□ -0.35
RTN4-210ENST00000427710 ADIPOQQ15848 244 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 SGCAQ16586 387 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 SLC16A14Q7RTX9 510 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 HDDC2Q7Z4H3 204 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 ZNF584Q8IVC4 421 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 ZDHHC21Q8IVQ6 265 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 MCUR1Q96AQ8 359 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 RASD2Q96D21 266 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 RSRC1Q96IZ7 334 aaKnown RBP12.87□□□□□ -0.35
RTN4-210ENST00000427710 Q96M85 177 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 FOXN4Q96NZ1 517 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 GRIP2Q9C0E4 1043 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 TMEM5Q9Y2B1 443 aa12.87□□□□□ -0.35
RTN4-210ENST00000427710 TCRBV5S2A0A599 114 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 SH3PXD2BA1X283 911 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 UNC119BA6NIH7 251 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 NPIPB13A6NJU9 1138 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 CENPBD1B2RD01 187 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 NPIPB4C9JG80 1138 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 GPRIN2O60269 458 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 PTP4A3O75365 173 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 UBOX5O94941 541 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 OR4A8P0C604 315 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 ITGA2P17301 1181 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 ZNF133P52736 654 aaPredicted RBP12.86□□□□□ -0.35
RTN4-210ENST00000427710 FXYD6P3P58550 94 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 PPP1R8Q12972 351 aaKnown RBP12.86□□□□□ -0.35
RTN4-210ENST00000427710 DAG1Q14118 895 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 TAF11Q15544 211 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 ETFDHQ16134 617 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 MSMPQ1L6U9 139 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 SWI5Q1ZZU3 235 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 C10orf128Q5T292 105 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 OTPQ5XKR4 325 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 TRPM8Q7Z2W7 1104 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 OR4F15Q8NGB8 312 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 COX4I2Q96KJ9 171 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 BDH2Q9BUT1 245 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 OR51B6Q9H340 312 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 TAS2R1Q9NYW7 299 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 ACTR3BQ9P1U1 418 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 SIGLEC7Q9Y286 467 aa12.86□□□□□ -0.35
RTN4-210ENST00000427710 SONP18583 2426 aaKnown RBP12.86□□□□□ -0.35
RTN4-210ENST00000427710 A0A1W2PPL8 197 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 RNF223E7ERA6 249 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 FARS2O95363 451 aaKnown RBP12.85□□□□□ -0.35
RTN4-210ENST00000427710 LY6G6DO95868 133 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 SCG5P05408 212 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 CD14P08571 375 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 ZNF35P13682 527 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 FOSL1P15407 271 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 SERPINF1P36955 418 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 NUDT6P53370 316 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 CHRNB3Q05901 458 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
RTN4-210ENST00000427710 RAB35Q15286 201 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 SPATS1Q496A3 300 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 MESTQ5EB52 335 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 TMEM53Q6P2H8 277 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 ZER1Q7Z7L7 766 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 DHFR2Q86XF0 187 aa12.85□□□□□ -0.35
RTN4-210ENST00000427710 PAQR4Q8N4S7 273 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms