RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 ARMC4Q5T2S8 1044 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 C1orf94Q6P1W5 598 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 HS3ST5Q8IZT8 346 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 ZNF786Q8N393 782 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 GPR137CQ8N3F9 429 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 CLDN22Q8N7P3 220 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 SLC25A44Q96H78 314 aaPredicted RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 TSPAN32Q96QS1 320 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 MBOAT4Q96T53 435 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 C1QTNF6Q9BXI9 259 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 TXNIPQ9H3M7 391 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 CRLF2Q9HC73 371 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 TMEFF2Q9UIK5 374 aaPredicted RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 A0A087WXM4 84 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 OR5H1A6NKK0 313 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 RPL36A-HNRNPH2H7BZ11 118 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 CCNB2O95067 398 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 CD3EP07766 207 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 IGFBP5P24593 272 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 HOXC12P31275 282 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 GSSP48637 474 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 ZNF83P51522 516 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 ERVK-25P63136 954 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 MICAQ29983 383 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 CEACAM16Q2WEN9 425 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 HIKESHIQ53FT3 197 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 KDM4DQ6B0I6 523 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 OR7E24Q6IFN5 339 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 LRFN4Q6PJG9 635 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 SEZ6L2Q6UXD5 910 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 ABHD12BQ7Z5M8 362 aaPredicted RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 THAP5Q7Z6K1 395 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 C8orf59Q8N0T1 100 aaPredicted RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 SYT14Q8NB59 555 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 OR6N1Q8NGY5 312 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 HDAC2Q92769 488 aaKnown RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 LRR1Q96L50 414 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 ADAD1Q96M93 576 aaKnown RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 MUS81Q96NY9 551 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 MYCBPQ99417 103 aaPredicted RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 KATNB1Q9BVA0 655 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 MRPL13Q9BYD1 178 aaKnown RBP13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 NELFAQ9H3P2 528 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 RNF115Q9Y4L5 304 aa13.74□□□□□ -0.21
CLK3P2-201ENST00000427566 A0A096LPE4 126 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 A0A1W2PPZ6 126 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 OR6C65A6NJZ3 312 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 TRMUO75648 421 aaKnown RBP13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 PRKACGP22612 351 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 FPR3P25089 353 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 RPL4P36578 427 aaKnown RBP13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 CSNK1A1P48729 337 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 PRPS1P60891 318 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 ARF1P84077 181 aaKnown RBP13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 TGFBR3Q03167 851 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 BSPH1Q075Z2 132 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 DEFB113Q30KQ7 82 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 ANKDD1AQ495B1 522 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 NCMAPQ5T1S8 102 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 P2RY8Q86VZ1 359 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 WDR31Q8NA23 367 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 AQP11Q8NBQ7 271 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 OR1K1Q8NGR3 316 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 GNPDA2Q8TDQ7 276 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 HTRA1Q92743 480 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 TMEM54Q969K7 222 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 ZNF566Q969W8 418 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 CCL19Q99731 98 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 FOXC2Q99958 501 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 KRCC1Q9NPI7 259 aaPredicted RBP13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 GLTPQ9NZD2 209 aa13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 PDP1Q9P0J1 537 aaPredicted RBP13.73□□□□□ -0.21
CLK3P2-201ENST00000427566 IGKV1D-43A0A0B4J1Z2 117 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 LOC100130705A0A1B0GUX0 176 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 NDUFB2O95178 105 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 CLIC3O95833 236 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 IGHMP01871 453 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 IGFBP1P08833 259 aaPredicted RBP13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 ATP6V1B1P15313 513 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 CD53P19397 219 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 ACVR1BP36896 505 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 DAP3P51398 398 aaKnown RBP13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 RPL27P61353 136 aaKnown RBP13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 TSPAN31Q12999 210 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 HIST3H3Q16695 136 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 RBM48Q5RL73 367 aaKnown RBP13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 ADAM5Q6NVV9 412 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 FAHD1Q6P587 224 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 KLHL24Q6TFL4 600 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 FAM122BQ7Z309 247 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 ZNF519Q8TB69 540 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 AKAP1Q92667 903 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 GTPBP3Q969Y2 492 aaKnown RBP13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 Q96M85 177 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 NIPSNAP1Q9BPW8 284 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 ULBP2Q9BZM5 246 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 EGLN3Q9H6Z9 239 aa13.72□□□□□ -0.21
CLK3P2-201ENST00000427566 NPAP1Q9NZP6 1156 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms