RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ERVK-25P63136 954 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ACTG2P63267 376 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CD200R1LQ6Q8B3 271 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 PLXDC2Q6UX71 529 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 ADGRG3Q86Y34 549 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CYB561A3Q8NBI2 242 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 DNAJA3Q96EY1 480 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 MOGAT1Q96PD6 335 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CNN2Q99439 309 aaKnown RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 NMNAT2Q9BZQ4 307 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 AKIP1Q9NQ31 210 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 SF3B6Q9Y3B4 125 aaKnown RBP13.95□□□□□ -0.18
SHOX2-202ENST00000425436 CORINQ9Y5Q5 1042 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 PMF1-BGLAPU3KQ54 211 aa13.95□□□□□ -0.18
SHOX2-202ENST00000425436 MYO7BQ6PIF6 2116 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 PNMA8CA0A1B0GUJ8 204 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 LRRN3E7EW58 273 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 LINC01387J3KSC0 135 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 J3QKU1 62 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 ZNF208O43345 1280 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 AHSA1O95433 338 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 CPN1P15169 458 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 ZNF12P17014 697 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 RPS5P46782 204 aaKnown RBP13.94□□□□□ -0.18
SHOX2-202ENST00000425436 CENPAP49450 140 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 RAC1P63000 192 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 RUNX1T1Q06455 604 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 LTBQ06643 244 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 SGCBQ16585 318 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
SHOX2-202ENST00000425436 C1orf140Q5VVS0 124 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 FAM122BQ7Z309 247 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 GGNQ86UU5 652 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 RPRMLQ8N4K4 120 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 SDR9C7Q8NEX9 313 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 OR5J2Q8NH18 312 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 MOSPD2Q8NHP6 518 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 HAVCR2Q8TDQ0 301 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 SNX18Q96RF0 628 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 PRDM14Q9GZV8 571 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 NUAK2Q9H093 628 aa13.94□□□□□ -0.18
SHOX2-202ENST00000425436 TXNL4BQ9NX01 149 aaKnown RBP13.94□□□□□ -0.18
SHOX2-202ENST00000425436 KIAA1549Q9HCM3 1950 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 EIF1AYO14602 144 aaKnown RBP13.93□□□□□ -0.18
SHOX2-202ENST00000425436 LRRTM2O43300 516 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 GLCEO94923 617 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 OR6A2O95222 327 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 RENP00797 406 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 CD40LGP29965 261 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 CA7P43166 264 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 CASP6P55212 293 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 ZNF45Q02386 682 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 RPL18Q07020 188 aaKnown RBP13.93□□□□□ -0.18
SHOX2-202ENST00000425436 BCL2A1Q16548 175 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 RTL6Q6ICC9 239 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 NCCRP1Q6ZVX7 275 aaPredicted RBP13.93□□□□□ -0.18
SHOX2-202ENST00000425436 IGFN1Q86VF2 1251 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 FJX1Q86VR8 437 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 SYS1Q8N2H4 156 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 DDIT4LQ96D03 193 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 NMNAT3Q96T66 252 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 MNTQ99583 582 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 CDADC1Q9BWV3 514 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 POTEKPQ9BYX7 375 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 KCNN2Q9H2S1 579 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 SERINC1Q9NRX5 453 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 ADAM18Q9Y3Q7 739 aa13.93□□□□□ -0.18
SHOX2-202ENST00000425436 A0A0J9YW62 118 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TEX13CA0A0J9YWL9 993 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 CCL21O00585 134 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TNFSF11O14788 317 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TFPIP10646 304 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 SPI1P17947 270 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 CELP19835 753 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TGFBR1P36897 503 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 BLVRAP53004 296 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 SELENBP1Q13228 472 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 DOC2BQ14184 412 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 LEG1Q6P5S2 330 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 RPTNQ6XPR3 784 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 KLBQ86Z14 1044 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 PM20D2Q8IYS1 436 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 MEIOBQ8N635 442 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TMEM99Q8N816 258 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 OR2T4Q8NH00 348 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 ZNF845Q96IR2 970 aaPredicted RBP13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TRIB1Q96RU8 372 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 OR11A1Q9GZK7 315 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 C6orf62Q9GZU0 229 aaPredicted RBP13.92□□□□□ -0.18
SHOX2-202ENST00000425436 TP63Q9H3D4 680 aaPredicted RBP13.92□□□□□ -0.18
SHOX2-202ENST00000425436 INIPQ9NRY2 104 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 MRPL39Q9NYK5 338 aaKnown RBP13.92□□□□□ -0.18
SHOX2-202ENST00000425436 FLNCQ14315 2725 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 UBR5O95071 2799 aaPredicted RBP13.92□□□□□ -0.18
SHOX2-202ENST00000425436 MPDZO75970 2070 aa13.92□□□□□ -0.18
SHOX2-202ENST00000425436 A0A1W2PNR3 127 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 ZC3H12DA2A288 527 aaKnown RBP13.91□□□□□ -0.18
SHOX2-202ENST00000425436 OR6C68A6NDL8 312 aa13.91□□□□□ -0.18
SHOX2-202ENST00000425436 AHRRA9YTQ3 701 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms