RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TERTO14746 1132 aaKnown RBP10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 OGG1O15527 345 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 LILRB5O75023 590 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 IFNGP01579 166 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 PMP2P02689 132 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 AKAIN1P0CW23 69 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 RCC1P18754 421 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 LAP3P28838 519 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 AGTR1P30556 359 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 RPL4P36578 427 aaKnown RBP10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF136P52737 540 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 ATPAF1Q5TC12 328 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 NKAIN2Q5VXU1 208 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 LCTLQ6UWM7 567 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 DHRS11Q6UWP2 260 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 GDPD4Q6W3E5 623 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM106AQ96A25 262 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 ZBTB8AQ96BR9 441 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 RASD2Q96D21 266 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 SMOC1Q9H4F8 434 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF443Q9Y2A4 671 aaPredicted RBP10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 TMED7Q9Y3B3 224 aa10.27□□□□□ -0.77
SEC61A1-202ENST00000424880 TVP23AA6NH52 213 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 RHPN2P1A8MT19 583 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 NUDT19A8MXV4 375 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 H7C1C5 153 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 TXNDC12O95881 172 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 GALTP07902 379 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 NGFRP08138 427 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC2A5P22732 501 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 NDUFS1P28331 727 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 PMELP40967 661 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 POU3F4P49335 361 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 PRLHRP49683 370 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 LCN6P62502 163 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 PPP1R1AQ13522 171 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 MRPL2Q5T653 305 aaKnown RBP10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 FAM46CQ5VWP2 391 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 FBXO46Q6PJ61 603 aaPredicted RBP10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 CLEC9AQ6UXN8 241 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF547Q8IVP9 402 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 C15orf54Q8N8G6 183 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 VWCEQ96DN2 955 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 C19orf43Q9BQ61 176 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 TMPRSS5Q9H3S3 457 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 CHMP1AQ9HD42 196 aaPredicted RBP10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 RTTNQ86VV8 2226 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 A0A1W2PPE2 198 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 RDH16O75452 317 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 CTAG2O75638 210 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ELFN1P0C7U0 828 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ACKR3P25106 362 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 HTR5AP47898 357 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 NUBP1P53384 320 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ENPP7Q6UWV6 458 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.26□□□□□ -0.776e-21■■■■■ 34.4
SEC61A1-202ENST00000424880 TMEFF1Q8IYR6 380 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 GABRG1Q8N1C3 465 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 OR5M8Q8NGP6 311 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 SUSD6Q92537 303 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 C14orf144Q96I85 54 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 CNN2Q99439 309 aaKnown RBP10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 SULT4A1Q9BR01 284 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 FN3KRPQ9HA64 309 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ADAP2Q9NPF8 381 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 IKZF2Q9UKS7 526 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 SNRNP200O75643 2136 aaKnown RBP10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 A0A087WV62 115 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 METTL12A8MUP2 240 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 MCIDASD6RGH6 385 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 RNASEK-C17orf49H0YIS7 233 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 OR2F2O95006 317 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 AIFM1O95831 613 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ITGA5P08648 1049 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 LAMP2P13473 410 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 HPGDP15428 266 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 PI3P19957 117 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 PRSS3P35030 304 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 OR2F1Q13607 317 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 MST1LQ2TV78 715 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 RPL22L1Q6P5R6 122 aaKnown RBP10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF813Q6ZN06 617 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 DEFB128Q7Z7B8 93 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM150AQ86TG1 271 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC35F3Q8IY50 421 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF561Q8N587 486 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 GVQW1Q8N7I0 195 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 VN1R2Q8NFZ6 395 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 OR2A12Q8NGT7 310 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF689Q96CS4 500 aaPredicted RBP10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 MFRPQ9BY79 579 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 CST11Q9H112 138 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC2A4RGQ9NR83 387 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 KLHDC2Q9Y2U9 406 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF281Q9Y2X9 895 aa10.26□□□□□ -0.77
SEC61A1-202ENST00000424880 FGF16O43320 207 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 PPIHO43447 177 aaKnown RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 PBX2P40425 430 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 FRKP42685 505 aaPredicted RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 LPAR6P43657 344 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms