RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 IGFBP3P17936 291 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-204ENST00000424143 NTSR1P30989 418 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 SLC6A8P48029 635 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 SEC13P55735 322 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 SKP2Q13309 424 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 MEF2DQ14814 521 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 KIR2DS5Q14953 304 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 C4orf46Q504U0 113 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF546Q86UE3 836 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF615Q8N8J6 731 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 OR51D1Q8NGF3 324 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 OR4C3Q8NH37 302 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 HMGB4Q8WW32 186 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 SPACA7Q96KW9 195 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 LPAR4Q99677 370 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
C9orf3-204ENST00000424143 C1QTNF6Q9BXI9 259 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM138Q9NPI0 162 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 PCDHB16Q9NRJ7 776 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 PLCL2Q9UPR0 1127 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 C2orf16Q68DN1 1984 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 BLOC1S5-TXNDC5H3BN57 136 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 CLDN4O14493 209 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 RDH16O75452 317 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 AKR7A3O95154 331 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 RAB3DO95716 219 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 MAS1P04201 325 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 CD3DP04234 171 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF735P0CB33 412 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 RAB6AP20340 208 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 SDHBP21912 280 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 SORDQ00796 357 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 ETFDHQ16134 617 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 MESTQ5EB52 335 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 LIN54Q6MZP7 749 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 CFAP77Q6ZQR2 320 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 MED25Q71SY5 747 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 CACUL1Q86Y37 369 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF679Q8IYX0 411 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 OR10G6Q8NH81 332 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 BMFQ96LC9 184 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 DGAT2Q96PD7 388 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 ZNF416Q9BWM5 594 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 FBXL2Q9UKC9 423 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 CLDN16Q9Y5I7 305 aa13.77□□□□□ -0.21
C9orf3-204ENST00000424143 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 K7EQS6 105 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 LGALS8O00214 317 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 PSMD9O00233 223 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 IL33O95760 270 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 IL2RAP01589 272 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 RLN2P04090 185 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 GP1BAP07359 652 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 ITGA5P08648 1049 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 CNR1P21554 472 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 EFNB2P52799 333 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 RPL18Q07020 188 aaKnown RBP13.76□□□□□ -0.21
C9orf3-204ENST00000424143 PLA2G7Q13093 441 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 WDR38Q5JTN6 314 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 C1orf100Q5SVJ3 147 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 JMJD6Q6NYC1 403 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-204ENST00000424143 C11orf88Q6PI97 169 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 LRFN4Q6PJG9 635 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 ACOT7LQ6ZUV0 252 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 BEST3Q8N1M1 668 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 C12orf76Q8N812 135 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-204ENST00000424143 ZDHHC22Q8N966 263 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 C7orf57Q8NEG2 295 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 OR4D10Q8NGI6 311 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 GPBAR1Q8TDU6 330 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 FBXW5Q969U6 566 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 SLC41A2Q96JW4 573 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 TSPAN32Q96QS1 320 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 CCDC3Q9BQI4 270 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 NUDT16L1Q9BRJ7 211 aaKnown RBP13.76□□□□□ -0.21
C9orf3-204ENST00000424143 PBX4Q9BYU1 374 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 LAT2Q9GZY6 243 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 OR10A5Q9H207 317 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 S1PR5Q9H228 398 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 POFUT1Q9H488 388 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 PRTFDC1Q9NRG1 225 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 CPNE7Q9UBL6 633 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 HS3ST3A1Q9Y663 406 aa13.76□□□□□ -0.21
C9orf3-204ENST00000424143 A0A1W2PPC1 479 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 LOC390937A0A1W2PQ73 354 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 KANTRA0A1W2PQU2 76 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 OR5H14A6NHG9 310 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 GRXCR1A8MXD5 290 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 GNB5O14775 395 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 MST1P26927 711 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 GRPRP30550 384 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 HSD17B7P56937 341 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 EGR4Q05215 589 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 SERTAD2Q14140 314 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 GRM7Q14831 915 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 ALG11Q2TAA5 492 aa13.75□□□□□ -0.21
C9orf3-204ENST00000424143 RAB12Q6IQ22 244 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms