RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SLC2A10O95528 541 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 OR8G3PP0DMU2 310 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 CD40P25942 277 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 HOXC12P31275 282 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 CDKN2AP42771 156 aaKnown RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 UBE2NP61088 152 aaKnown RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 FMODQ06828 376 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 CD47Q08722 323 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 KRR1Q13601 381 aaKnown RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 KPNB1Q14974 876 aaKnown RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 ZNF362Q5T0B9 420 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 KLHL17Q6TDP4 642 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 KLHL24Q6TFL4 600 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 TMEM108Q6UXF1 575 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 PTCHD4Q6ZW05 846 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 ADCK1Q86TW2 530 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 SKA3Q8IX90 412 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 HS3ST5Q8IZT8 346 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 OR8D4Q8NGM9 314 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 GTPBP3Q969Y2 492 aaKnown RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 NABP1Q96AH0 204 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 ERMAPQ96PL5 475 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 DDOQ99489 341 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 PLA2G12AQ9BZM1 189 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 LIME1Q9H400 295 aa16.09■□□□□ 0.17
HDAC6-205ENST00000423941 DENND2DQ9H6A0 471 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 PDP1Q9P0J1 537 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-205ENST00000423941 SHISA9B4DS77 424 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 ENTPD5O75356 428 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 PPP1R3DO95685 299 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 CD3EP07766 207 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 B4GALT1P15291 398 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 PRKACGP22612 351 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 ZNF83P51522 516 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 ZNF84P51523 738 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 GABPB1Q06547 395 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-205ENST00000423941 ALKBH2Q6NS38 261 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 ZNF704Q6ZNC4 412 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-205ENST00000423941 LNX2Q8N448 690 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 FGFBP3Q8TAT2 258 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 IGFBPL1Q8WX77 278 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 RADILQ96JH8 1075 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 C1QTNF6Q9BXI9 259 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 RNF115Q9Y4L5 304 aa16.08■□□□□ 0.16
HDAC6-205ENST00000423941 SPG11Q96JI7 2443 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 TEX15Q9BXT5 2789 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 IGHV1-18A0A0C4DH31 117 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 H3BNX3 289 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 SOCS2O14508 198 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 XKRYO14609 159 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 FCGR1AP12314 374 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 ANXA8P13928 327 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 FASP25445 335 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 TUBA1BP68363 451 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 TUBA4AP68366 448 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 FAM27BQ5VT28 67 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 FBXW10Q5XX13 1052 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 FAHD1Q6P587 224 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 TUBA1AQ71U36 451 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 DPPA2Q7Z7J5 298 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 OR5K1Q8NHB7 308 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 NRGNQ92686 78 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 SLC38A2Q96QD8 506 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 BDH2Q9BUT1 245 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 SIAEQ9HAT2 523 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 NOX3Q9HBY0 568 aa16.07■□□□□ 0.16
HDAC6-205ENST00000423941 ROS1P08922 2347 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 H7C1C5 153 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 M0R1B8 84 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 E2F6O75461 281 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 HLA-HP01893 362 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 IGFBP1P08833 259 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-205ENST00000423941 HIST1H1CP16403 213 aaKnown RBP16.06■□□□□ 0.16
HDAC6-205ENST00000423941 ZNF14P17017 642 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-205ENST00000423941 NPR2P20594 1047 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 ARR3P36575 388 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 LCN6P62502 163 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 ETFDHQ16134 617 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 ZFP1Q6P2D0 407 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 MDP1Q86V88 176 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 NPEPL1Q8NDH3 523 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 LRTOMTQ8WZ04 291 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 RAB3IPQ96QF0 476 aaPredicted RBP16.06■□□□□ 0.16
HDAC6-205ENST00000423941 IFT27Q9BW83 186 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 ST6GALNAC2Q9UJ37 374 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 BAIAP2Q9UQB8 552 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 POLQO75417 2590 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 NOTCH2Q04721 2471 aa16.06■□□□□ 0.16
HDAC6-205ENST00000423941 ABCD4O14678 606 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 HS3ST1O14792 307 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 UBL3O95164 117 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 MMP7P09237 267 aaPredicted RBP16.05■□□□□ 0.16
HDAC6-205ENST00000423941 CECR9P0C854 216 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 CTLA4P16410 223 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 CDAP32320 146 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 ARHGDIAP52565 204 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 RAB1AP62820 205 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 GSG1Q2KHT4 349 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 AMIGO2Q86SJ2 522 aa16.05■□□□□ 0.16
HDAC6-205ENST00000423941 ZBTB46Q86UZ6 589 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 1716.3 ms