RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 APH1AQ96BI3 265 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 SLC25A36Q96CQ1 311 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 AURKBQ96GD4 344 aaPredicted RBP4.95□□□□□ -1.62
LINC00458-201ENST00000423442 TMEM19Q96HH6 336 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 NPAS1Q99742 590 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 TRIM2Q9C040 744 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 ACTR6Q9GZN1 396 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 PAIP1Q9H074 479 aaKnown RBP4.95□□□□□ -1.62
LINC00458-201ENST00000423442 BCL2L10Q9HD36 194 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 A4GALTQ9NPC4 353 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 GID8Q9NWU2 228 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 ZDHHC8Q9ULC8 765 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 ANGPT4Q9Y264 503 aa4.95□□□□□ -1.62
LINC00458-201ENST00000423442 CUBNO60494 3623 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 OR6C65A6NJZ3 312 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 CLDN24A6NM45 220 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 AHSA1O95433 338 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 HIST1H2ABP04908 130 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 GGT1P19440 569 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 PSMB1P20618 241 aaKnown RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 SHC1P29353 583 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 IFNA8P32881 189 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 OR3A2P47893 321 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 RAB1AP62820 205 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 RBBP4Q09028 425 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 FUT5Q11128 374 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 C1DQ13901 141 aaKnown RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 CEACAM7Q14002 265 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 SCARB2Q14108 478 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 GUSBP1Q15486 140 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 OR7A5Q15622 319 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 STK11Q15831 433 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 ACKR1Q16570 336 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 RUNDC3AQ59EK9 446 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 OTUD3Q5T2D3 398 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 LRIF1Q5T3J3 769 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 C1QTNF12Q5T7M4 302 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 INTS11Q5TA45 600 aaKnown RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 C1orf140Q5VVS0 124 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 FBXW9Q5XUX1 488 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 C5orf46Q6UWT4 87 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 ZNF836Q6ZNA1 936 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 HIST3H2AQ7L7L0 130 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 AAED1Q7RTV5 226 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 NUFIP2Q7Z417 695 aaKnown RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 FUNDC1Q8IVP5 155 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 CLIP4Q8N3C7 705 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 C10orf53Q8N6V4 93 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 FAM71CQ8NEG0 241 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 NFKBIDQ8NI38 313 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 HIST1H2ACQ93077 130 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 MAL2Q969L2 176 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 S100PBPQ96BU1 408 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 DNAJA3Q96EY1 480 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 SLC47A1Q96FL8 570 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 RADILQ96JH8 1075 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 ARL5BQ96KC2 179 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 EPYCQ99645 322 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 PSD2Q9BQI7 771 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 THAP7Q9BT49 309 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 PTDSS2Q9BVG9 487 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 SF3B5Q9BWJ5 86 aaKnown RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 TMEM120AQ9BXJ8 343 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 SRXN1Q9BYN0 137 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 OR11A1Q9GZK7 315 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 PLEKHF2Q9H8W4 249 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 UBTD1Q9HAC8 227 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 MED4Q9NPJ6 270 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 SLC6A13Q9NSD5 602 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 FAIMQ9NVQ4 179 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 BEX4Q9NWD9 120 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 ADPRHL2Q9NX46 363 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 GRHPRQ9UBQ7 328 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 OSGIN1Q9UJX0 560 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 ZNF443Q9Y2A4 671 aaPredicted RBP4.94□□□□□ -1.62
LINC00458-201ENST00000423442 SLC9A8Q9Y2E8 581 aa4.94□□□□□ -1.62
LINC00458-201ENST00000423442 LOC100653049A0A140TA62 436 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 TMEM72A0PK05 275 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 J3KRW8 73 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 M0QX08 132 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 AP3D1O14617 1153 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 SMAD9O15198 467 aaKnown RBP4.93□□□□□ -1.62
LINC00458-201ENST00000423442 CLOCKO15516 846 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 ATP8B1O43520 1251 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 CCDC22O60826 627 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 GMNNO75496 209 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 LYZL6O75951 148 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 KRT34O76011 436 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 AKR7A3O95154 331 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 OR6A2O95222 327 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 CSTBP04080 98 aaKnown RBP4.93□□□□□ -1.62
LINC00458-201ENST00000423442 NQO1P15559 274 aaKnown RBP4.93□□□□□ -1.62
LINC00458-201ENST00000423442 ZNF43P17038 809 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 CDH2P19022 906 aaPredicted RBP4.93□□□□□ -1.62
LINC00458-201ENST00000423442 RPS4Y1P22090 263 aaKnown RBP4.93□□□□□ -1.62
LINC00458-201ENST00000423442 PAX7P23759 505 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 FPR3P25089 353 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 AQP1P29972 269 aa4.93□□□□□ -1.62
LINC00458-201ENST00000423442 PPIFP30405 207 aaKnown RBP4.93□□□□□ -1.62
LINC00458-201ENST00000423442 PRKAR1BP31321 381 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms