RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 OR52E2Q8NGJ4 325 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 NRG4Q8WWG1 115 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 RDH12Q96NR8 316 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 RBP7Q96R05 134 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 HDHD5Q9BXW7 423 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 TOR3AQ9H497 397 aa14.93□□□□□ -0.02
COL7A1-202ENST00000422991 OR6C68A6NDL8 312 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF99A8MXY4 864 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-202ENST00000422991 E9PQ18 207 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 DLGAP1O14490 977 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 SURF4O15260 269 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 RAD51DO75771 328 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 SNAP29O95721 258 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 RENP00797 406 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 HMGN1P05114 100 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 CTLA4P16410 223 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF3P17036 446 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 IGFBP2P18065 325 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 IL32P24001 234 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 ARF1P84077 181 aaKnown RBP14.92□□□□□ -0.02
COL7A1-202ENST00000422991 TGFBR3Q03167 851 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 CRMP1Q14194 572 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 GABRA6Q16445 453 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 ZIK1Q3SY52 487 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-202ENST00000422991 C12orf73Q69YU5 71 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF627Q7L945 461 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 CYB561A3Q8NBI2 242 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 STEAP2Q8NFT2 490 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 OR1K1Q8NGR3 316 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 BOD1Q96IK1 185 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 DDOQ99489 341 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 TEX12Q9BXU0 123 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 GRIP2Q9C0E4 1043 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 ACTR6Q9GZN1 396 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 OR10A4Q9H209 315 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 FN3KQ9H479 309 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 SMPD3Q9NY59 655 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-202ENST00000422991 UGT2A1Q9Y4X1 527 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 NAV2Q8IVL1 2488 aa14.92□□□□□ -0.02
COL7A1-202ENST00000422991 CIB4A0PJX0 185 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 PRSS44E7EML9 344 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 SEC14L2O76054 403 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF84P51523 738 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 ANKRD16Q6P6B7 361 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 ACBD4Q8NC06 268 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 NSMAFQ92636 917 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 S100PBPQ96BU1 408 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 SLC38A2Q96QD8 506 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 FOXB1Q99853 325 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 PRRG3Q9BZD7 231 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 NUAK2Q9H093 628 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 NELFAQ9H3P2 528 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 RPRD1BQ9NQG5 326 aaKnown RBP14.91□□□□□ -0.02
COL7A1-202ENST00000422991 TMEM38BQ9NVV0 291 aa14.91□□□□□ -0.02
COL7A1-202ENST00000422991 UNC79Q9P2D8 2635 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 IGLV1-36A0A0B4J1U3 117 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 DCTN6O00399 190 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 SLC16A7O60669 478 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 B4GALT1P15291 398 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 CRABP1P29762 137 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 OR7E24Q6IFN5 339 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 ZNF813Q6ZN06 617 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 FOXL2NBQ6ZUU3 175 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 ZBTB46Q86UZ6 589 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 C17orf78Q8N4C9 275 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 BCL2L2Q92843 193 aaPredicted RBP14.9□□□□□ -0.02
COL7A1-202ENST00000422991 HRASLS5Q96KN8 279 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 MUS81Q96NY9 551 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 TSSK2Q96PF2 358 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 PITX2Q99697 317 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 NMNAT2Q9BZQ4 307 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 RACGAP1Q9H0H5 632 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 VCXQ9H320 206 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 TVP23BQ9NYZ1 205 aa14.9□□□□□ -0.02
COL7A1-202ENST00000422991 OR5H1A6NKK0 313 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 M0R129 80 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 KHDRBS3O75525 346 aaKnown RBP14.89□□□□□ -0.03
COL7A1-202ENST00000422991 PPP3CBP16298 524 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 PEX19P40855 299 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 SLC25A1P53007 311 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 MRPS34P82930 218 aaKnown RBP14.89□□□□□ -0.03
COL7A1-202ENST00000422991 DBPQ10586 325 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-202ENST00000422991 SNTB1Q13884 538 aaKnown RBP14.89□□□□□ -0.03
COL7A1-202ENST00000422991 ETFDHQ16134 617 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 SNAPC1Q16533 368 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 TBRG1Q3YBR2 411 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 HIKESHIQ53FT3 197 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 HIST2H2BCQ6DN03 193 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 DNM1P34Q6PK57 102 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 KLHL24Q6TFL4 600 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 OR6V1Q8N148 313 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 OR9Q1Q8NGQ5 310 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 NABP1Q96AH0 204 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 PLEKHA8Q96JA3 519 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 USB1Q9BQ65 265 aaKnown RBP14.89□□□□□ -0.03
COL7A1-202ENST00000422991 SLC17A5Q9NRA2 495 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 NDRG4Q9ULP0 352 aaKnown RBP14.89□□□□□ -0.03
COL7A1-202ENST00000422991 FKBP7Q9Y680 259 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 CRYBG3Q68DQ2 2970 aa14.89□□□□□ -0.03
COL7A1-202ENST00000422991 NBPF19A0A087WUL8 3843 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms