RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 CALHM2Q9HA72 323 aa15.21■□□□□ 0.03
CCDC28B-202ENST00000421922 ADGRL4Q9HBW9 690 aa15.21■□□□□ 0.03
CCDC28B-202ENST00000421922 GLTPQ9NZD2 209 aa15.21■□□□□ 0.03
CCDC28B-202ENST00000421922 ALPK2Q86TB3 2170 aa15.21■□□□□ 0.02
CCDC28B-202ENST00000421922 HELZ2Q9BYK8 2649 aaKnown RBP15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 IGLV1-36A0A0B4J1U3 117 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 A0A1W2PPL8 197 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 TVP23AA6NH52 213 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 FIGNL2A6NMB9 653 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF724A8MTY0 619 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 C12orf71A8MTZ7 269 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 DCTN6O00399 190 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 AQP8O94778 261 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF823P16415 610 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 SELENOPP49908 381 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF84P51523 738 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 EMX1Q04741 257 aaPredicted RBP15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 DBPQ10586 325 aaPredicted RBP15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 GPR141Q7Z602 305 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 OR6N2Q8NGY6 317 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 SIGLEC11Q96RL6 698 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 RNF122Q9H9V4 155 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 ACOT13Q9NPJ3 140 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 GLRX2Q9NS18 164 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 COA3Q9Y2R0 106 aaPredicted RBP15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 PIEZO2Q9H5I5 2752 aa15.2■□□□□ 0.02
CCDC28B-202ENST00000421922 OR6C65A6NJZ3 312 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF670-ZNF695F2Z2N8 137 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 SELENOFO60613 162 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 YES1P07947 543 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 QDPRP09417 244 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 GABRA1P14867 456 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 PSMB9P28065 219 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 MED22Q15528 200 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 LINC01590Q5TEZ4 76 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 RNLSQ5VYX0 342 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 PLXDC2Q6UX71 529 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 B3GNT6Q6ZMB0 384 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 TMPRSS11AQ6ZMR5 421 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF367Q7RTV3 350 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 SLC16A9Q7RTY1 509 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 GLB1L2Q8IW92 636 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 TUSC5Q8IXB3 177 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 TMEM123Q8N131 208 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 KLHL36Q8N4N3 616 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 ZIC4Q8N9L1 334 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF511Q8NB15 262 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 MCHR2Q969V1 340 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 FOXN4Q96NZ1 517 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 BCO1Q9HAY6 547 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 GP6Q9HCN6 339 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 TAS2R16Q9NYV7 291 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 CLCF1Q9UBD9 225 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 CLEC4AQ9UMR7 237 aa15.19■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF99A8MXY4 864 aaPredicted RBP15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 ERVH48-1M5A8F1 160 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 WDR1O75083 606 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF432O94892 652 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 IGHA1P01876 353 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 TFAP2AP05549 437 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 OR2T7P0C7T2 308 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 PTGER4P35408 488 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 ADAM8P78325 824 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 RBPJQ06330 500 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 ACSF3Q4G176 576 aaPredicted RBP15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 OR2A2Q6IF42 318 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 GFRALQ6UXV0 394 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 WDFY1Q8IWB7 410 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 C20orf196Q8IYI0 205 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF100Q8IYN0 542 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 OR2T27Q8NH04 317 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNRF4Q8WWF5 429 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 TMEM54Q969K7 222 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 MNTQ99583 582 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 ALG8Q9BVK2 526 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 JAM3Q9BX67 310 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 SEC61A2Q9H9S3 476 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 POLR1DQ9Y2S0 133 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 TMEM14AQ9Y6G1 99 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 GTF3C1Q12789 2109 aa15.18■□□□□ 0.02
CCDC28B-202ENST00000421922 TMEM129A0AVI4 362 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 TTLL8A6PVC2 850 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 PHYHO14832 338 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNHIT1O43257 154 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 TMCC2O75069 709 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 WISP2O76076 250 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 TGM6O95932 706 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 PTHP01270 115 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 SPARCP09486 303 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 HSMCR30P0CW71 290 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 JUNBP17275 347 aaPredicted RBP15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 PCMT1P22061 227 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 LAP3P28838 519 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ETV1P50549 477 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 IRF3Q14653 427 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ETFDHQ16134 617 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 LYPD4Q6UWN0 246 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 LHFPL3Q86UP9 236 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 CD163Q86VB7 1156 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms