RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 UBAP1Q9NZ09 502 aa11.02□□□□□ -0.65
TMEM53-206ENST00000420706 DNAJC27Q9NZQ0 273 aa11.02□□□□□ -0.65
TMEM53-206ENST00000420706 UPB1Q9UBR1 384 aa11.02□□□□□ -0.65
TMEM53-206ENST00000420706 ZNF629Q9UEG4 869 aaPredicted RBP11.02□□□□□ -0.65
TMEM53-206ENST00000420706 COA3Q9Y2R0 106 aaPredicted RBP11.02□□□□□ -0.65
TMEM53-206ENST00000420706 SPTA1P02549 2419 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 FREM1Q5H8C1 2179 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 IGLV1-36A0A0B4J1U3 117 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 FAM171A2A8MVW0 826 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 PYCARD-AS1I3L0S3 204 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 PRODHO43272 600 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 LRRTM2O43300 516 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 KRT33AO76009 404 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 PYCR1P32322 319 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 FOXG1P55316 489 aaPredicted RBP11.01□□□□□ -0.65
TMEM53-206ENST00000420706 ADORA2A-AS1P86434 159 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 TEKQ02763 1124 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 FAPQ12884 760 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 SMN1Q16637 294 aaKnown RBP11.01□□□□□ -0.65
TMEM53-206ENST00000420706 C4orf17Q53FE4 359 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 KLHL12Q53G59 568 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 SLC35D3Q5M8T2 416 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 LINC01590Q5TEZ4 76 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 DNM1P34Q6PK57 102 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 MEPCEQ7L2J0 689 aaKnown RBP11.01□□□□□ -0.65
TMEM53-206ENST00000420706 UBE2J2Q8N2K1 259 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 OR51L1Q8NGJ5 315 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 OR2T4Q8NH00 348 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 NSMAFQ92636 917 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 ZNF837Q96EG3 531 aaPredicted RBP11.01□□□□□ -0.65
TMEM53-206ENST00000420706 TEAD3Q99594 435 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 RBM24Q9BX46 236 aaKnown RBP11.01□□□□□ -0.65
TMEM53-206ENST00000420706 ULBP2Q9BZM5 246 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 RACGAP1Q9H0H5 632 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 OPN3Q9H1Y3 402 aaPredicted RBP11.01□□□□□ -0.65
TMEM53-206ENST00000420706 RERGLQ9H628 205 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 CRLF2Q9HC73 371 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 MOKQ9UQ07 419 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 PCDHGB5Q9Y5G0 923 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 POLEQ07864 2286 aa11.01□□□□□ -0.65
TMEM53-206ENST00000420706 MYO7BQ6PIF6 2116 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 SH3D21A4FU49 640 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 CCDC182A6NF36 153 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 SMNDC1O75940 238 aaKnown RBP eCLIP11□□□□□ -0.65
TMEM53-206ENST00000420706 GLCEO94923 617 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 CNOT4O95628 575 aaKnown RBP11□□□□□ -0.65
TMEM53-206ENST00000420706 BMP5P22003 454 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 FMO3P31513 532 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 CDH11P55287 796 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 ROR2Q01974 943 aaKnown RBP11□□□□□ -0.65
TMEM53-206ENST00000420706 APOFQ13790 326 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 STK11Q15831 433 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 CEACAM16Q2WEN9 425 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 C6orf141Q5SZD1 244 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 KRT80Q6KB66 452 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 ZNF474Q6S9Z5 364 aaPredicted RBP11□□□□□ -0.65
TMEM53-206ENST00000420706 B3GLCTQ6Y288 498 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 GID4Q8IVV7 300 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 PROKR2Q8NFJ6 384 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 CCDC120Q96HB5 630 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 ALKBH3Q96Q83 286 aaPredicted RBP11□□□□□ -0.65
TMEM53-206ENST00000420706 PIGMQ9H3S5 423 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 MALT1Q9UDY8 824 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 ESPL1Q14674 2120 aa11□□□□□ -0.65
TMEM53-206ENST00000420706 INTS1Q8N201 2190 aaKnown RBP11□□□□□ -0.65
TMEM53-206ENST00000420706 A8MXE2 369 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 ZNF587BE7ETH6 402 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 DVL2O14641 736 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 MSTNO14793 375 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 GPANK1O95872 356 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 SCG5P05408 212 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 PLA2G2AP14555 144 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 LAP3P28838 519 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 GSTT1P30711 240 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 HTR1FP30939 366 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 CENPAP49450 140 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 ZNF84P51523 738 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 NUDT6P53370 316 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 CXCR4P61073 352 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 RPS7P62081 194 aaKnown RBP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 TMED1Q13445 227 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 MTFR2Q6P444 385 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 Q6ZT83 130 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 BEND4Q6ZU67 534 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 FOXL2NBQ6ZUU3 175 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 ABHD12BQ7Z5M8 362 aaPredicted RBP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 ZNF511Q8NB15 262 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 RELL2Q8NC24 303 aaPredicted RBP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 KISS1RQ969F8 398 aaPredicted RBP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 RFKQ969G6 155 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 ZMYND19Q96E35 227 aaPredicted RBP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 FOXN4Q96NZ1 517 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 AMBNQ9NP70 447 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 PLCXD1Q9NUJ7 323 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 HAO2Q9NYQ3 351 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 JKAMPQ9P055 326 aa10.99□□□□□ -0.65
TMEM53-206ENST00000420706 WARS2Q9UGM6 360 aaKnown RBP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 ERRFI1Q9UJM3 462 aaPredicted RBP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.99□□□□□ -0.65
TMEM53-206ENST00000420706 RPL36Q9Y3U8 105 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms