RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PCSK6P29122 969 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
NUP50-204ENST00000417702 CD47Q08722 323 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 TOP3AQ13472 1001 aaPredicted RBP13.25□□□□□ -0.29
NUP50-204ENST00000417702 RAB39AQ14964 217 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 KRTAP21-3Q3LHN1 58 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 SLC36A2Q495M3 483 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 MBOAT2Q6ZWT7 520 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 SLC16A14Q7RTX9 510 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 OAFQ86UD1 273 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 RNF148Q8N7C7 305 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 OR51A7Q8NH64 312 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 ZNF75AQ96N20 296 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 RAB1BQ9H0U4 201 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 KCNN2Q9H2S1 579 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 NMNAT1Q9HAN9 279 aaPredicted RBP13.25□□□□□ -0.29
NUP50-204ENST00000417702 CMAHPQ9Y471 501 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 SONP18583 2426 aaKnown RBP13.25□□□□□ -0.29
NUP50-204ENST00000417702 JMJD1CQ15652 2540 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 TRAV27A0A087WT01 109 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 A0A087WUU8 490 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 B2RBV5 119 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 PRSS23O95084 383 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 H1F0P07305 194 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 ZNF35P13682 527 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 FUT4P22083 530 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 SLC9A3P48764 834 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 PPOXP50336 477 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 PDLIM4P50479 330 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 CTXN1P60606 82 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 RPL27P61353 136 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 RPS23P62266 143 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 SAMD4BQ5PRF9 694 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 C10orf128Q5T292 105 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 FAM205BPQ63HN1 556 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 TBPL2Q6SJ96 375 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 TRPM8Q7Z2W7 1104 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 MEX3DQ86XN8 651 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 DEFB107AQ8IZN7 70 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 SVOPLQ8N434 492 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 RBM15BQ8NDT2 890 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 FGFBP3Q8TAT2 258 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 FNDC8Q8TC99 324 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 HDAC2Q92769 488 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 SORCS2Q96PQ0 1159 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 RBP7Q96R05 134 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 CDRT15Q96T59 188 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 ALG12Q9BV10 488 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 NDEL1Q9GZM8 345 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 DYNLRB1Q9NP97 96 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 DCAF13Q9NV06 445 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 ZNF346Q9UL40 294 aaKnown RBP13.24□□□□□ -0.29
NUP50-204ENST00000417702 TMEM5Q9Y2B1 443 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 RTTNQ86VV8 2226 aa13.24□□□□□ -0.29
NUP50-204ENST00000417702 A6NIZ1 184 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 LY6HO94772 140 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 SLC2A10O95528 541 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 PTHP01270 115 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 ITGA2P17301 1181 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 RHCEP18577 417 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 TCN1P20061 433 aaPredicted RBP13.23□□□□□ -0.29
NUP50-204ENST00000417702 GLRXP35754 106 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 RPL4P36578 427 aaKnown RBP13.23□□□□□ -0.29
NUP50-204ENST00000417702 ZNF133P52736 654 aaPredicted RBP13.23□□□□□ -0.29
NUP50-204ENST00000417702 RAP1BP61224 184 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 RAP1AP62834 184 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 PLP2Q04941 152 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 IGFN1Q86VF2 1251 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 SLC30A7Q8NEW0 376 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 OR13C2Q8NGS9 318 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 C10orf105Q8TEF2 133 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 NSMAFQ92636 917 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 DOK1Q99704 481 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 LRMDAQ9H2I8 198 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 C1orf198Q9H425 327 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 GORASP2Q9H8Y8 452 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 SIAEQ9HAT2 523 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 MYOZ1Q9NP98 299 aaPredicted RBP13.23□□□□□ -0.29
NUP50-204ENST00000417702 NDUFAF4Q9P032 175 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 SLC7A8Q9UHI5 535 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 MAGEL2Q9UJ55 1249 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 ZANQ9Y493 2812 aa13.23□□□□□ -0.29
NUP50-204ENST00000417702 IQCMA0A1B0GVH7 501 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 A0A1W2PRQ8 180 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 SLC22A23A1A5C7 686 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 SH3PXD2BA1X283 911 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 INAFM1C9JVW0 142 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 IGHMP01871 453 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 HSD17B1P14061 328 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 GUCA1AP43080 201 aaPredicted RBP13.22□□□□□ -0.29
NUP50-204ENST00000417702 GPR4P46093 362 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
NUP50-204ENST00000417702 DGCR6Q14129 220 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 CARTPTQ16568 116 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 SPATS1Q496A3 300 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 FGD3Q5JSP0 725 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms