RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 FHL1Q13642 323 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 RIN1Q13671 783 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 C10orf128Q5T292 105 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 PODNL1Q6PEZ8 512 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 SLC16A14Q7RTX9 510 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 ARPINQ7Z6K5 226 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 PAQR4Q8N4S7 273 aaPredicted RBP15.36■□□□□ 0.05
CPNE1-210ENST00000416778 LZICQ8WZA0 190 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 HDAC2Q92769 488 aaKnown RBP15.36■□□□□ 0.05
CPNE1-210ENST00000416778 BPIFA2Q96DR5 249 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 PRRC1Q96M27 445 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 SYT3Q9BQG1 590 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 MS4A5Q9H3V2 200 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 RNF121Q9H920 327 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 SIAEQ9HAT2 523 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 DYNLRB1Q9NP97 96 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 MAN2C1Q9NTJ4 1040 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 CDC42EP3Q9UKI2 254 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 HIF3AQ9Y2N7 669 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 UGT2A1Q9Y4X1 527 aa15.36■□□□□ 0.05
CPNE1-210ENST00000416778 IGKV1D-43A0A0B4J1Z2 117 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 LOC100289279A0A1B0GTE1 492 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 MCIDASD6RGH6 385 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 LYNX1G3V0Z9 82 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 J3KTA2 159 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 CXCR6O00574 342 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 NME4O00746 187 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 LILRA1O75019 489 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 IFNA2P01563 188 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 TACSTD2P09758 323 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 LYNX1P0DP58 116 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 IFI30P13284 250 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 CCL2P13500 99 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 APEHP13798 732 aaKnown RBP15.35■□□□□ 0.05
CPNE1-210ENST00000416778 ZNF84P51523 738 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 PRKCDQ05655 676 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 SLC36A2Q495M3 483 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 TMEM53Q6P2H8 277 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 SLC25A47Q6Q0C1 308 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 CBLL1Q75N03 491 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 HDDC2Q7Z4H3 204 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 TSEN54Q7Z6J9 526 aaKnown RBP15.35■□□□□ 0.05
CPNE1-210ENST00000416778 ARIH2OSQ8N7S6 290 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 LRRC75AQ8NAA5 344 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 SLC30A7Q8NEW0 376 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 NOXO1Q8NFA2 376 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 SOX7Q9BT81 388 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 FNDC11Q9BVV2 318 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 BEX2Q9BXY8 128 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 TPK1Q9H3S4 243 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 MYEF2Q9P2K5 600 aaKnown RBP15.35■□□□□ 0.05
CPNE1-210ENST00000416778 STX18Q9P2W9 335 aaKnown RBP15.35■□□□□ 0.05
CPNE1-210ENST00000416778 RHCGQ9UBD6 479 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 SLC7A8Q9UHI5 535 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 DUSP13Q9UII6 198 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 ZNF346Q9UL40 294 aaKnown RBP15.35■□□□□ 0.05
CPNE1-210ENST00000416778 FZR1Q9UM11 496 aa15.35■□□□□ 0.05
CPNE1-210ENST00000416778 SLC22A23A1A5C7 686 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 LRP5LA4QPB2 252 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 SLC2A10O95528 541 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 FAM157CP0CG43 387 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 TCN1P20061 433 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-210ENST00000416778 COL8A2P25067 703 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 CDAP32320 146 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 IFNA8P32881 189 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 ALDH3B1P43353 468 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 SLC7A2P52569 658 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 RPS23P62266 143 aaKnown RBP15.34■□□□□ 0.05
CPNE1-210ENST00000416778 MRPS34P82930 218 aaKnown RBP15.34■□□□□ 0.05
CPNE1-210ENST00000416778 TAF11Q15544 211 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 ALG10Q5BKT4 473 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 ELFN2Q5R3F8 820 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 TBPL2Q6SJ96 375 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 HACD2Q6Y1H2 254 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 CXXC5Q7LFL8 322 aaKnown RBP15.34■□□□□ 0.05
CPNE1-210ENST00000416778 RNF113BQ8IZP6 322 aaKnown RBP15.34■□□□□ 0.05
CPNE1-210ENST00000416778 LRRC18Q8N456 261 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 CPEB3Q8NE35 698 aaKnown RBP15.34■□□□□ 0.05
CPNE1-210ENST00000416778 SMURF2Q9HAU4 748 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 MALRD1Q5VYJ5 2156 aa15.34■□□□□ 0.05
CPNE1-210ENST00000416778 A0A087WUU8 490 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 M0R233 179 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 PRSS23O95084 383 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 PTHP01270 115 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 HPXP02790 462 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 IFNW1P05000 195 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 ZNF250P15622 560 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 ZNF16P17020 682 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-210ENST00000416778 LSP1P33241 339 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 GSK3BP49841 420 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 UCP2P55851 309 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 CTXN1P60606 82 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 RPL27P61353 136 aaKnown RBP15.33■□□□□ 0.04
CPNE1-210ENST00000416778 TRAM2Q15035 370 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 THEM4Q5T1C6 240 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 MEX3DQ86XN8 651 aaKnown RBP15.33■□□□□ 0.04
CPNE1-210ENST00000416778 NRMQ8IXM6 262 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 OFCC1Q8IZS5 231 aa15.33■□□□□ 0.04
CPNE1-210ENST00000416778 RBM15BQ8NDT2 890 aaKnown RBP15.33■□□□□ 0.04
CPNE1-210ENST00000416778 OR1J2Q8NGS2 313 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms